Gene detail

Detailed information of scaffold21.g143.t1 in Morbakka virulenta

Genomic Location: scaffold21:5852531...5888233
NR annotation: XP_047128453.1, leucine-rich repeat serine/threonine-protein kinase 1-like [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

scaffold21.g143.t1

AGGGAGTAGAAACGAAATATACCGTTTGAAGCATTTTGTTTTGTACTATAAGAAAGCGGATCACAACCTGATTTGTGTTCAGAAATGGAGAGCAAAGTTGTTTGAACTGAATTGTATGACGTGGTAGTGTACGGAAATTATGAAGAAGCAAAGAACATCATCGAGGGTTTTCCACTTGGCATCAGAAGTCAAGTAATGAATAGGTTTTACAGAGGGCCTAATACTCTACTATATCGGGCCAGTTATAAAGGCTATAAAGATATAGTTGAACTGCTTCTGGACAATGGAGCTGATGGAAGGCAGAATCTGGACACCGGAATTTCCCCCTTATATGCAGCAGTGTTAGCGGGGCAGTTGCCTGTAGTTCAGATTTTGAGTGAACGCATACCACACTTGCGTACCTTACGGACTACAAAAGATTTAACAGAACCCATTCACATAGCAGCATTAAAGGGCTATGTGAAAATAGTGAAATATTTACTTCAGTTCCGAGGGCCAATCTTGCCCGCAGGCACCGAAGGCGGTAATTCGGCTTCAGAACAGGAACCAGGTAACATCTCTGGTTGTTACATCAAAGTAAATACTTGTGACCATAATAATAGCACACCATTGCATTTAGCAAGCAGGCATGGGCATAAAGATGTTGTGCAGGAACTGTTGAAGTGTGGACCAATTGTGAAGGGGGATGTTACAGTTTTTCCACCAGACAAAGTGGTTATCGATTGTAGAACATATTTGGGATGGACACCGTTATTACTTGCCACTGGACAGGGATATACAAAGGTTGTTGAGGTATTATTGAAGAATGGAGCGGATGTGAACGTCATGACTAACGATGGCTGTACTGCTCTCCAAATTGCGTGCCGCCTTAATGATGAGGCACTAGTACAACTTCTCTTGGACTGTGGTGCACGAGATATTGATGAATTAGCAAAAACTGAAAGCATCAGGAAAGGAAAGGATAATCTAACACTGATTCTTCTGAGTACAGaataagattatattattctggtcttcattatacttatggaagcaggtgacagcaagtcaccaaaggtcccaaaagtcctctttccaggtctataaagacaacactttcctcaaaattcttgccgttcctaacaaagccgttttttgcattacctctatcctgattttaagacctaatttctgtatatagtcgtcaaacttctttcctactgcacctagagcacctatgacaacaggtatgattagaaccttctttaagtcccataaacgggcaacctcatctctcaacagctggtacttttcaatcttttcaagttctttttcacagacccgagaatcacttggtattgcaacatctataatgatggcctccttctttcttttgtccataacaactatgtcaggccttcttgcttgcaccgcttgatcacactggatgttgaaatcccaaaggactttgtgtgattctgtttcaacgacaccttctggctgttgttggtaccagttctcagctctttcggctccggcagccccacatgctgtccaatggatataccttgctacattgtcatgccgtcgcttatattcacgctgagcgagtttgctgcattcactcacaatgtgcgaaacgctttctcctttttcgccacacattctacaaagtggtgactcagcagacttatcaatattatatttgatgtagttagtccgaagcgattgttcttgggcactacatatcagagcttctgtgggtcctttaaggtcacccttgacaagccacttccaggtgttaatctcgtccactcccttcaagtttttcacaaactggccatgtaatgctttatctttccaagtattctcaagttccttacttctgttgtgtttgaattgtttgggttcgataacagtttctgtggcaattgttttatgatttactacctccttcaacattggttcagcactcttccgaatgtaatatcctaagctattttcttccacccttacacattgtttacaccctattaagccacgtccgcctctttttctaggcacatacaatctcgccacatcactattggggttgagtactttatgcatggtcatcagtttcctagttttcctgtcaagttgttccagttcttcattattccacctcagtataccagccccatatctcatcagagacactgcccatgtattgatagctttgagtttattcctgccatttagacgtgatccaagaactagcctggttcgtcgtagatattcctttccaaatttatccttcatttctctttccttgatcttatcatactctagtattcccagatacttgtaaccttccgacgtgacctcactaaccttttcgttactgggtaacttgattccttcggttttgcaaactttcccacgcttaagcaccagaaccccacatttcttaatcccaaactccatcccaatatctttacttatcatttccaccgatgataataatccatcgatttccttttcattctttccatagactttaaggtcatccataaataataagtgattgatcttcaaatctccccctttcaatatatacccagcttttgtctgttttaaaacatctgtaatcggcatcatacatatgacaaatagtaaaggagaaaggctgtctccttggaagatgcctcttctgatgttgacactacctaatttttcacctgcagatgtcaactccgttttccaactgctcattgtcttctttacgaaagaaattacattacccgaa

Protein

Uniprot

Uniprot term	Description
A0A7H0DNG9	Ankyrin repeat domain-containing protein OPG015 OS=Monkeypox virus OX=10244 GN=OPG015 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00023	Ank	Ankyrin repeat	Repeat	Interproscan
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR050889	Family	Dendritic Spine Regulation and Scaffold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24166	ROLLING PEBBLES, ISOFORM B	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan