Detailed information of scaffold21.g96.t2 in Morbakka virulenta

Genomic Location: scaffold21:4140394...4176053
NR annotation: XP_020627343.1, sex comb on midleg-like protein 2 isoform X1 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9UQR0Sex comb on midleg-like protein 2 OS=Homo sapiens OX=9606 GN=SCML2 PE=1 SV=1
Q9VHA0Polycomb protein Scm OS=Drosophila melanogaster OX=7227 GN=Scm PE=1 SV=2
D3ZWK4Lethal(3)malignant brain tumor-like protein 1 OS=Rattus norvegicus OX=10116 GN=L3mbtl1 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02820MBTmbt repeatDomainInterproscan
PF12140SLEDSLED domainDomainInterproscan
PF00536SAM_1SAM domain (Sterile alpha motif)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004092RepeatMbt repeatInterproscan
IPR050548FamilyPolycomb group and chromatin remodeling factorsInterproscan
IPR038348Homologous_superfamilySLED domain superfamilyInterproscan
IPR001660DomainSterile alpha motif domainInterproscan
IPR013761Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan
IPR021987DomainSLED domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12247POLYCOMB GROUP PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan
GO:0045892Biological Processnegative regulation of DNA-templated transcriptionInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11461SCMH1; polycomb protein SCMH1-Chromosome and associated proteinsko03036deepkoala

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