Gene detail

Detailed information of scaffold2160.g2.t1 in Aurelia aurita complex sp. Pacific

Genomic Location: scaffold2160:14696...15784
NR annotation: no NCBI-NR hit recorded
Species Aurelia aurita complex sp. Pacific · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00180 all species →	Iso_dh	Isocitrate/isopropylmalate dehydrogenase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004429 all species →	Family	Isopropylmalate dehydrogenase	Interproscan
IPR019818 all species →	Conserved_site	Isocitrate/isopropylmalate dehydrogenase, conserved site	Interproscan
IPR024084 all species →	Domain	Isopropylmalate dehydrogenase-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42979 all species →	3-ISOPROPYLMALATE DEHYDROGENASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003862 all species →	Molecular Function	3-isopropylmalate dehydrogenase activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0009098 all species →	Biological Process	L-leucine biosynthetic process	Interproscan
GO:0000287 all species →	Molecular Function	magnesium ion binding	Interproscan
GO:0016616 all species →	Molecular Function	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	Interproscan
GO:0051287 all species →	Molecular Function	NAD binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00052	leuB, IMDH; 3-isopropylmalate dehydrogenase	EC:1.1.1.85	Valine, leucine and isoleucine biosynthesis	ko00290	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.