Detailed information of scaffold219.g2.t1 in Morbakka virulenta

Genomic Location: scaffold219:9216...103694
NR annotation: XP_051037417.1, poly(A)-specific ribonuclease PARN isoform X3 [Phodopus roborovskii]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O95453Poly(A)-specific ribonuclease PARN OS=Homo sapiens OX=9606 GN=PARN PE=1 SV=1
Q90ZA1Poly(A)-specific ribonuclease PARN OS=Xenopus laevis OX=8355 GN=parn PE=1 SV=1
Q8VDG3Poly(A)-specific ribonuclease PARN OS=Mus musculus OX=10090 GN=Parn PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04857CAF1CAF1 family ribonucleaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006941FamilyRibonuclease CAF1Interproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR051181FamilyCAF1 family poly(A)-specific ribonucleasesInterproscan
IPR036867Homologous_superfamilyR3H domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15092POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0000175Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0000289Biological Processnuclear-transcribed mRNA poly(A) tail shorteningInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004535Molecular Functionpoly(A)-specific ribonuclease activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

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