Detailed information of scaffold227.g30.t1 in Morbakka virulenta

Genomic Location: scaffold227:1199356...1343009
NR annotation: XP_047139331.1, laminin subunit alpha-1 isoform X1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P02469Laminin subunit beta-1 OS=Mus musculus OX=10090 GN=Lamb1 PE=1 SV=3
Q00174Laminin subunit alpha OS=Drosophila melanogaster OX=7227 GN=LanA PE=1 SV=2
O75445Usherin OS=Homo sapiens OX=9606 GN=USH2A PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02210Laminin_G_2Laminin G domainDomainInterproscan
PF00053Laminin_EGFLaminin EGF domainDomainInterproscan
PF00054Laminin_G_1Laminin G domainDomainInterproscan
PF00168C2C2 domainDomainInterproscan
PF15711ILEIInterleukin-like EMT inducerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000008DomainC2 domainInterproscan
IPR002049DomainLaminin-type EGF domainInterproscan
IPR001791DomainLaminin G domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR008211DomainLaminin, N-terminalInterproscan
IPR035892Homologous_superfamilyC2 domain superfamilyInterproscan
IPR050440FamilyLaminin/Netrin Extracellular MatrixInterproscan
IPR039477DomainILEI/PANDER domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10574NETRIN/LAMININ-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0009887Biological Processanimal organ morphogenesisInterproscan
GO:0009888Biological Processtissue developmentInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K05637LAMA1_2; laminin, alpha 1/2-Viral myocarditisko05416deepkoala

TOP