Gene detail

Detailed information of scaffold237.g10.t1 in Morbakka virulenta

Genomic Location: scaffold237:436481...438513
NR annotation: HHY45947.1, serpin family protein [Bacillota bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

scaffold237.g10.t1

GATTATTCTTCCTTAACTGGAAACTCTATCTTGCTAATGTTAGATACTGGTTGCAATAAGAATATAGCTGTTCCTAATAAGAGGTAAAGACATTTTCTTGTTTATCTTTGTTAGTTGATGTACGAAAACTGAACTTTGTTTCCAGATTTGTCAAGAGTATGGCAAATTTAAAGATATCCCTGGTTTGTATTTTTTTAAACTGCTTCATTGTTGCCAGTGGAATCAAGCTTACAAAAAGGGATCTCTCCTTGGTTGTAAATGATTTTGCCTTCGATCTTTACCGAGTTGTTACATCAGCTGACAACAGTGGAAAGAATTTGTTTTTTTCACCTTACAGCATTTACACAGCGCTAACAATGATCGCCCTTGGAGCAAGAGGCAACACCGAGAAAGAACTTAACGATATTATGAGTTGGCAGTATTTTATTACAGGCGATGAACAAAATAATGGCCACCAGTCTTTTAAAGACTTCACTAGCTTATTTATGGGGGAAAAACACAGTACTGGGTCTTTTTACCTGGCTAACAAACTCTGGCTTCAGAAATATTTTAAAACTATTTACCTTAAACGCTATTATCGGACCCGTTTATTTCAATTTTATTCAACTGACCTTGGAATGGTTAATTTTGCACTAGATCCTATAGCCGCAAGACACAGAATAAACGAGTGGGTAAAGGAAGAGACCAACAATAAAATTAAAGAACTTATTAGACCGGGGCTGTTGACATCGTTGACCAGGCTTGTTCTTACCAATGCGATATATTTTAAAAGTAAATGGAAAATACAGTTCAATAAATATAGAACTTCAACCATGAAGTTCCATGTACATGCGAACAGACAAGTTCAAGTACCCATGATGTTCGTCAAGTCAAAGTTTAGATATACTGAAAACGACGAATGTAAAATTGTTGAATTACCATACCAAAATAATCAAATGTCAATGTTCGTGTTTGTTCCAAGAATTAAGAAAACACTTTTTGATCTCGAGAAGTTTATTTCAGCAGAGGTAATTCACTTTCTTAACGACAGTATGAAAGCATTCGAAGTTTCAGTCAGGATACCAAAATTCAAGCTGGAAAGTTCTTTAAATTTGAAGAAAGACCTAAAGCAGCTTGGAATCAGAGATTTATTCGATCCTGTCACTGCTGATTTATCAGGGATTCTAGGATTCAGAAGTCTGTACGTTTCACACGTCACACACAAATCATTTGTAGAAGTAAATGAGTTTGGAACTGAAGCAGCAGCGGCAACAGCAGTACTTGCTACAAAATATAGCAGCTTAAACAATCCACGAAAATTTATTGTAGCAAACAAGCCATTCTTTTTTGTTATTCGACACAATATTTCTGGGGCCCTGATATTTATAGGAAGACTTATTGACCCGACTTCATCCTAAACGACGCATTGCAATGGTCTTGCTGGCATTAAAAATCTTCTTTGAACAGTTACTTGGCTAGGTTGCCTCAACAAACCCATCCTTTTGCTAAAAGAAATCATACAAGTTGTCATGCTGAAAAGTATTTCTTGATGAAAGAGAATATTTATTCCAGCTACCTTATCTACTACCATATACACTAAAAATTAGAAATTCCCTTTTACCTCTAATAATATAATCCAAAAGAGTTCTTCCTTTAAACGACTTTAGTTGGTATGTTGATTGTAAAAAGCAGAGAGTCCCCTGATTAAGATTGATATTTTCTTTTATTAGTATCAGAGGATTGTAAACGTTTATTCCCCAGGGTAGTCTTTTGGTATGTTGTTTATCTTTAATTGTTTAGATTAATCCCTTTAATTGTTAATGTGACCCTACACACAGTTAATTAACAATTCGTTTTCAGAAATTTATATTGGACGGTCCATGTTCCCAAAGAATTATTGAATTTCAGTAGATTCATGTTTCATTTTCCAATAATTTATCCAGTTAGGAGCTGAAGTGTTGGGATAATGAATTGTCACAGAAATGTTACCTCTATCTATTATAGTCAGAGATCTGCGGAAGCACCTTTCATTCGAAAAAAGATATCAATTAATC

Protein

Uniprot

Uniprot term	Description
Q5I0S8	Leukocyte elastase inhibitor OS=Xenopus tropicalis OX=8364 GN=serpinb1 PE=2 SV=1
P30740	Leukocyte elastase inhibitor OS=Homo sapiens OX=9606 GN=SERPINB1 PE=1 SV=1
Q52L45	Leukocyte elastase inhibitor OS=Xenopus laevis OX=8355 GN=serpinb1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00079	Serpin	Serpin (serine protease inhibitor)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036186	Homologous_superfamily	Serpin superfamily	Interproscan
IPR000215	Family	Serpin family	Interproscan
IPR023796	Domain	Serpin domain	Interproscan
IPR042185	Homologous_superfamily	Serpin superfamily, domain 2	Interproscan
IPR023795	Conserved_site	Serpin, conserved site	Interproscan
IPR042178	Homologous_superfamily	Serpin superfamily, domain 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11461	SERINE PROTEASE INHIBITOR, SERPIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004867	Molecular Function	serine-type endopeptidase inhibitor activity	Interproscan
GO:0005615	Cellular Component	extracellular space	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K13963	SERPINB; serpin B	-	Peptidases and inhibitors	ko01002	deepkoala