Gene detail

Detailed information of scaffold237.g18.t2 in Aurelia aurita complex sp. Pacific

Genomic Location: scaffold237:164146...188740
NR annotation: no NCBI-NR hit recorded
Species Aurelia aurita complex sp. Pacific · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00435 all species →	Spectrin	Spectrin repeat	Domain	Interproscan
PF17902 all species →	SH3_10	SH3 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002017 all species →	Repeat	Spectrin repeat	Interproscan
IPR041615 all species →	Domain	Desmoplakin, SH3 domain	Interproscan
IPR018159 all species →	Repeat	Spectrin/alpha-actinin	Interproscan
IPR043197 all species →	Family	Plakin	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23169 all species →	ENVOPLAKIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005198 all species →	Molecular Function	structural molecule activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005882 all species →	Cellular Component	intermediate filament	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0042060 all species →	Biological Process	wound healing	Interproscan
GO:0045104 all species →	Biological Process	intermediate filament cytoskeleton organization	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for scaffold237.g18.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.