Detailed information of scaffold239.g2.t3 in Aurelia aurita complex sp. Pacific

Genomic Location: scaffold239:10316...45020
NR annotation: no NCBI-NR hit recorded
Species abbreviation AAURI2 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17867
all species →
AAA_lid_7Midasin AAA lid domainDomainInterproscan
PF21108
all species →
MDN1_4thMidasin AAA+ ATPase lid domainDomainInterproscan
PF07728
all species →
AAA_5AAA domain (dynein-related subfamily)DomainInterproscan
PF17865
all species →
AAA_lid_5Midasin AAA lid domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR040848
all species →
DomainMidasin, AAA lid domain 7Interproscan
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR048617
all species →
DomainMidasin, lid domain 4Interproscan
IPR003593
all species →
DomainAAA+ ATPase domainInterproscan
IPR011704
all species →
DomainATPase, dynein-related, AAA domainInterproscan
IPR041190
all species →
DomainMidasin AAA lid domain 5Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48103
all species →
MIDASIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016887
all species →
Molecular FunctionATP hydrolysis activityInterproscan
GO:0000027
all species →
Biological Processribosomal large subunit assemblyInterproscan
GO:0000055
all species →
Biological Processribosomal large subunit export from nucleusInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0030687
all species →
Cellular Componentpreribosome, large subunit precursorInterproscan
GO:0005524
all species →
Molecular FunctionATP bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K14572MDN1, REA1; midasin-Ribosome biogenesisko03009deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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