Gene detail

Detailed information of scaffold2435.g2.t1 in Aurelia aurita complex sp. Pacific

Genomic Location: scaffold2435:37026...38537
NR annotation: no NCBI-NR hit recorded
Species Aurelia aurita complex sp. Pacific · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00815 all species →	Histidinol_dh	Histidinol dehydrogenase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012131 all species →	Family	Histidinol dehydrogenase	Interproscan
IPR016161 all species →	Homologous_superfamily	Aldehyde/histidinol dehydrogenase	Interproscan
IPR022695 all species →	Family	Histidinol dehydrogenase, monofunctional	Interproscan
IPR001692 all species →	Conserved_site	Histidinol dehydrogenase, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21256 all species →	HISTIDINOL DEHYDROGENASE HDH	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016616 all species →	Molecular Function	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	Interproscan
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan
GO:0051287 all species →	Molecular Function	NAD binding	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan
GO:0000105 all species →	Biological Process	L-histidine biosynthetic process	Interproscan
GO:0004399 all species →	Molecular Function	histidinol dehydrogenase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00013	hisD; histidinol dehydrogenase	EC:1.1.1.23	Histidine metabolism	ko00340	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.