Gene detail

Detailed information of scaffold25.g28.t1 in Morbakka virulenta

Genomic Location: scaffold25:967112...986904
NR annotation: XP_047145194.1, proton-coupled folate transporter isoform X2 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

scaffold25.g28.t1

GTTTATTCAGATACTGAAAGGTTTCTGTTATTCAAGAAAATATTAAAAGTTAAGAAAACAAAGTTTATGTATAAAAATCTAGGAAACCAAAAGGAAGAAACATCGACAGGATAATTATTAGAGAAGGAATTACCAGCAAATGAGTTTCTCTTGGAAGAGTGGGGAGTACACATAACTCATTTAGAGTGGGTAAAGGACTGAAAAGTTGTACAAACGTCACCATCTTTATTTTTGCGTTAAAACAGTAAAAACCCTTGTTATTTCATGTTATCAAGGATCGATTTTTACGTTTACCTTCAATACAAAATTAGACTGGAACATTGTGTAAAGGAAGCAATAACCATTTGCAGAGCACCATACAAAGTGTATTTCCCCTGTTCAAAACTAAGAATACACATTTATCAATCAATAGTCAGCAAAGTGATTCAGTAGTGTTACAATTCAAAGAAGCCATAGTGAAAAAGAAAATTGATTTTTATGCTCCCTTTTTCTATACTCGTTATTTGACAAATGATATTACGCAACAGATGGTATCTTTAATTTGTCAACTTGGAAGTGAAGGGTATTCCTTACAGGATAGCAACATAACAGCCGGTGAAACTGGCTCTACGCTCGTCAACAATAGCAAAGAAAGCAAAGACAAAATTGACGTTCAAAAAAAAGGACAAAAATTTCCTTGGAATTTTTTCCAATCTTCGTTATCTCGAATTACAGTTGAGCCTGTCACATTTTGCTATGCATGTGCAATGATACTTCACGCACCAATAATACAGCAGTATGTTTATCATAGGATAAGTATTGATTCAGGGTTACCCACAACTATCTATAATTCAGAAACTAGTGCTTGTGATGACGAAGTCTCTGAAACATCAGCTTCCTTAGCATCAATAAGGAAAGAAGTTCAATCAAAGGCCTCTTATGTGCATCTCGGGGTCGTTTTATCTGCAAGTATACCCTCAGTATTTATGGCTCTATTACTTGGGTCATGGTCTGATATGGCAGGTAGGAAAGTAGTTATGATAATGCCCGTTATCGGTGGAACATTTGAAGCACTGTTTATACTTGTAACCATGTATGCCAATCTACCGCTGTATACTTTATTTTGTGGAAGTTTTATCAATGGATTTTGTGGATTCTTTACCACCATGATTTTAGCTGTATTTTCATATATAGCTGATATCACAGAGGAGTCTCAAAGAGCATTTAGACTTGGTATTTTAGAGGCAATAGCCTTTGTATCAGGAATGACTAGTCATCTAACCAGTGGCTGGTGGATCAAACATCTTGGTTTTAAAGCTCCCTATTGGTTTATTCTGGGACTTCATACTTTTACACTATTTTATCTGACACTTGCATTACCTGAATCTAGACCTCCTTCAAAACAAAGGTCTTTAAAGGATCTATTTAGCAGAACACATATACAAAATATAATGACACTGTTTCAAAAACCACGGAGTCAAAAAAGATGGCAACTTATGGCATTAATTATTACATCTGCATTTATGATGTTGTCCTCAATTGGATTTGGCAGTGTCATCGTACTTTATGCATTAGACAGCCCATTTTGCTGTTCACCAATTATGATTGGATATTTTTTAGCGGAGAGTATGTTTATCCAAGCTATTGGAGCCATGTTTGGTTTTCTCATACTTCGAAAGATCATATCCGAAACAACGTTGACACAGCTGGGAGTTTGTTCTATCATTGGTTCACTTGTCATGATGGCTTTTATTAAAAAAAGAATATTGATGTTTGTTGGTAAGTATAAACTGTTGATTAATTACCAagatttgatcgcatttggactgaggagcatgccaacaccacctacggttgcattcatattgtttttcgtggcagaactggtgacaagggtccagcctttcccaacatctttgtattctaattcgttcgtatcatgaaatatacggtgttcttggatgcatacgacatcaattttccattttattgagttgacaacaagttcggggatctgattaatggtgttgagtgtgcgtacattaaatgttgaaatgatgatggtatttttgcatttcatcaggtttgatttttgggtctctagttgcttttcgaactccgccggagaatcctgaacagcggtagaacgcgctccttggtgaaccgcgcgacgagcgatgcgggatgaatgtctggggagttgtgtagtcataaaaaaagtctttcgatagctgatatactgactgcgctcgctacttctacagccagttgaaacagttataacttgtcgaaagctgcttccagacacagaggtcataactaccatattgccgccagattctggaacagtcgcgccatgggtttggttctttgcactagttttgtctggtttctccccttcgacctgtctggcatggttaaacctaccaggaactaaagttcccgccagcatagctctccggatcgtaaaaacacgcaagccactccaccacgtcaaggtttagtgcaaggagtgcaacagaaataaaagaagcttatcatcagcttagattgattacaagaaagtattcgatagtgt

Protein

Uniprot

Uniprot term	Description
Q7ZWG6	Proton-coupled folate transporter OS=Danio rerio OX=7955 GN=slc46a1 PE=2 SV=1
Q5F4B8	Lysosomal proton-coupled steroid conjugate and bile acid symporter SLC46A3 OS=Gallus gallus OX=9031 GN=SLC46A3 PE=2 SV=1
Q9DC26	Lysosomal proton-coupled steroid conjugate and bile acid symporter SLC46A3 OS=Mus musculus OX=10090 GN=Slc46a3 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07690	MFS_1	Major Facilitator Superfamily	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036259	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR011701	Family	Major facilitator superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23507	ZGC:174356	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14613	SLC46A1; MFS transporter, PCFT/HCP family, solute carrier family 46 (folate transporter), member 1	-	Transporters	ko02000	deepkoala