Gene detail

Detailed information of scaffold250.g4.t2 in Aurelia aurita complex sp. Pacific

Genomic Location: scaffold250:80576...99850
NR annotation: no NCBI-NR hit recorded
Species Aurelia aurita complex sp. Pacific · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02487 all species →	CLN3	CLN3 protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018460 all species →	Family	Batten's disease protein Cln3, subgroup	Interproscan
IPR003492 all species →	Family	Batten's disease protein Cln3	Interproscan
IPR036259 all species →	Homologous_superfamily	MFS transporter superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10981 all species →	BATTENIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005764 all species →	Cellular Component	lysosome	Interproscan
GO:0005773 all species →	Cellular Component	vacuole	Interproscan
GO:0007040 all species →	Biological Process	lysosome organization	Interproscan
GO:0051453 all species →	Biological Process	regulation of intracellular pH	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12389	BTS, CLN3; battenin	-	Lysosome	ko04142	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.