Detailed information of scaffold2583.g2.t3 in Aurelia aurita complex sp. Pacific

Genomic Location: scaffold2583:4662...35254
NR annotation: no NCBI-NR hit recorded
Species Aurelia aurita complex sp. Pacific · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Ubiquitin familyUBD|ZnF|NZF · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00648
all species →
Peptidase_C2Calpain family cysteine proteaseFamilyInterproscan
PF00641
all species →
zf-RanBPZn-finger in Ran binding protein and othersDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036443
all species →
Homologous_superfamilyZinc finger, RanBP2-type superfamilyInterproscan
IPR001876
all species →
DomainZinc finger, RanBP2-typeInterproscan
IPR050420
all species →
FamilyCalpainInterproscan
IPR000169
all species →
Active_siteCysteine peptidase, cysteine active siteInterproscan
IPR001300
all species →
DomainPeptidase C2, calpain, catalytic domainInterproscan
IPR038765
all species →
Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR022684
all species →
FamilyPeptidase C2, calpain familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10183
all species →
CALPAINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004198
all species →
Molecular Functioncalcium-dependent cysteine-type endopeptidase activityInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan
GO:0006508
all species →
Biological ProcessproteolysisInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for scaffold2583.g2.t3.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP