Genomic Location: scaffold26:929961...1034586
NR annotation: XP_048589334.1, WD repeat-containing protein 19 [Nematostella vectensis]
| CDS | |||||
| scaffold26.g24.t2 | |||||
| Transcript |
| scaffold26.g24.t2 |
| Protein |
| scaffold26.g24.t2 |
| Uniprot term | Description | ||||
|---|---|---|---|---|---|
| Q3UGF1 | WD repeat-containing protein 19 OS=Mus musculus OX=10090 GN=Wdr19 PE=1 SV=1 | ||||
| Q8NEZ3 | WD repeat-containing protein 19 OS=Homo sapiens OX=9606 GN=WDR19 PE=1 SV=2 | ||||
| G5ECZ4 | WD repeat-containing protein dyf-2 OS=Caenorhabditis elegans OX=6239 GN=dyf-2 PE=1 SV=1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | UBD|Other|Beta-prp |
| Ubiquitin Family | E3|E3 adaptor Cullin RING|CDC20 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF12894 | ANAPC4_WD40 | Anaphase-promoting complex subunit 4 WD40 domain | Repeat | Interproscan |
| PF15911 | WD40_3 | WD domain, G-beta repeat | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR015943 | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR024977 | Domain | Anaphase-promoting complex subunit 4-like, WD40 domain | Interproscan |
| IPR011990 | Homologous_superfamily | Tetratricopeptide-like helical domain superfamily | Interproscan |
| IPR036322 | Homologous_superfamily | WD40-repeat-containing domain superfamily | Interproscan |
| IPR040379 | Family | WD repeat-containing protein 19/dyf-2 | Interproscan |
| IPR039468 | Repeat | WDR19, WD40 repeat | Interproscan |
| IPR001680 | Repeat | WD40 repeat | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR14920 | OSMOTIC AVOIDANCE ABNORMAL PROTEIN 1/WD REPEAT MEMBRANE PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005929 | Cellular Component | cilium | Interproscan |
| GO:0030991 | Cellular Component | intraciliary transport particle A | Interproscan |
| GO:0035721 | Biological Process | intraciliary retrograde transport | Interproscan |
| GO:0060271 | Biological Process | cilium assembly | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K19671 | WDR19, IFT144; WD repeat-containing protein 19 | - | Cilium and associated proteins | ko03037 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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