Detailed information of scaffold265.g29.t1 in Morbakka virulenta

Genomic Location: scaffold265:1010647...1040406
NR annotation: KAF1664306.1, tRNA (cytosine(34)-C(5))-methyltransferase, partial [Aptenodytes patagonicus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5ZLV4RNA cytosine-C(5)-methyltransferase NSUN2 OS=Gallus gallus OX=9031 GN=NSUN2 PE=2 SV=1
Q08J23RNA cytosine C(5)-methyltransferase NSUN2 OS=Homo sapiens OX=9606 GN=NSUN2 PE=1 SV=2
Q1HFZ0RNA cytosine C(5)-methyltransferase NSUN2 OS=Mus musculus OX=10090 GN=Nsun2 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01189Methyltr_RsmB-F16S rRNA methyltransferase RsmB/FFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR023270FamilytRNA (C5-cytosine) methyltransferase, NCL1Interproscan
IPR049560DomainSAM-dependent methyltransferase RsmB-F/NOP2-type, catalytic coreInterproscan
IPR023267FamilyRNA (C5-cytosine) methyltransferaseInterproscan
IPR018314Conserved_siteBacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved siteInterproscan
IPR001678DomainSAM-dependent methyltransferase RsmB-F/NOP2-type domainInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22808NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016428Molecular FunctiontRNA (cytidine-5-)-methyltransferase activityInterproscan
GO:0000049Molecular FunctiontRNA bindingInterproscan
GO:0001510Biological ProcessRNA methylationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0008168Molecular Functionmethyltransferase activityInterproscan
GO:0008173Molecular FunctionRNA methyltransferase activityInterproscan
GO:0030488Biological ProcesstRNA methylationInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan

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