Gene detail

Detailed information of scaffold27.g49.t1 in Morbakka virulenta

Genomic Location: scaffold27:1549265...1606109
NR annotation: XP_047136441.1, nuclear envelope integral membrane protein 1 isoform X2 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

scaffold27.g49.t1

TCCATCATGCAAATAGCAATATAGAGTCGTCATTATAAGCTGTCAACACAACTCGATATAACGCCGTGTTTAACTTTATCAGAATAGACCTCGTTTCAAGTTCCCTTACGAGAATTTTCAACCTGGTCTAGGAAGCCATTCTAAGGTGTTATTAATGAATTTTAAAACTTTTAATTTGAGTTCCTTTTAATGTAAAGTGACGAATTAATTTCTTTTTAAATAAATTGCACATGCCCCGTAGCCTGAAAGTGGTTTCTGCATAACTGTTATTTTATAATGGAAGCATTTAAATTATGTTTTAAGCCATTATAAAAGACAAATACTTGTAAGAGGTATTTTATTTTTGACGTTACTGTTAAATTTGTGTTTATTAGCCCCAACTTTACAAGGCGTATCTCAAACTGGCCTGAAGAGTTTTAATCAAATATATCCCCTCTGTTAGGGATTGCAAGTAAAATCAAATTGGGTATTATGGTGGTGGTGTTTTTGTAAACTAATGAAGAGCATGACCAAGGAATACCGTGATGATACAGACAGACCATAAGCTGACAATCAGTGTATTGCCATGGATGTATGCGTGCATTGAAGTAAGGTTTTGGCCTGTAGCTGTGAACTGTATCAGTATGTTAGTGAGAAAACCCCTGATGCTGTTATTCGTACATGGCTGTAGCTGCAGTTGGGCAGTTGACTGAGATTTTAAAACCGCACGTTTAAAATAACCTATGTTTTTACAATGAACGTTGTTAGTCATTACTTGAAAAGAATAAACACTTGTACAATGAATAGTCGATCAAGACTTCAACGTTTTATGACCGTGTTGGTATGGGGTTTTCCAAACTTCGACATTGTATTTTGTATTGGTTAATTGAAGAAACATGGGGTTCATATTTCACTGCAAAAGATGGTATAGTCGTTCGTTCATAGCACAGTATGTCAGCCAGCACCGAAGCTTGCAATATGTACCTTGATTTAGATGAAAGAATCCAGTTTACTTGAGCCTTAACCATGGAAATACTCTATCCCCATCAGCCTTTAGCTCTGAAAATGCTAAATTTGTGGCTATTATATTTGTATCTGTATAATGGAGTCTGTGCCACAGGTACGTTGACCAAAGGAGAACAAAAAGTTAACGGTGACACTGCTGGTATTTGCACCAAGGTTGTAAAAGGAGAAGTAAAAGAGAGTAATAGATCTAAAGAGATTTATTGCTTTAATAAAAGTGAAAGAAAGGAAATTCACAAGTTATTCTGTACTCTTAATGTCAAAATAGGAAGTGAAAATGGTGTCTTTGCAGTTTCAAGGAGTGACAGACTGGATTATTTCAAGAAAGAAGAAAATACATTTATAAGGTCATTGGCGTCTATTATTCCAAGGACTATAACATATGAAAACAAAACTACTGAGCAAATTTCACCATTTGAGGACACATTTTTGAAAGTCATAATGAAGGAGAAAAACACTCAGCATTGGATTTATGTCCACGAGTTATGGTTCGACAAGAATTTATTCCTTTGTTTCAGTTTGGGCGTATTTCTGTTTTGTTTTGCCAAATCACTTTGCAGACACGTGTCTTTTATTTACCTGACTGGATTCACATTTGGAATTTTCATATCGTGGCTTCTCTTGCTACTAATCCTAGTCAAATTTCTTCCAGCAAAGAGAGGATTGGTTACTTCAGTTTTGTTGGTGGGAACAAATCTTGGACTCTTTATAGCCCGTTTATTGTATGACAACATTATTTATTTGATATTATGCTACAAAACATTTGCGGCTTGGTACTTCGGCATTGTAGGTCTGGTAGTGTTTGCTTCCATTTACTACTACGATCCGGCTAGAAATGTACGGTTTTTGAATCTTGTTCAATGGACGTTTCAGCTAATTGGTTGCTACCTTGTTTTTGTTGGAACACGAATACAGGAAGTATCTGTCACCATCATTGTTCTTATGGTTTTCTCTTATACAATTACACAATTCATTAGCGCTAAAAGGATGTTGTCAACACTTTATTTCAGTTGTTTACCATATAAACTGCAATATATGTTAACAAAGCCAAAACAACGGATGCTTACAAATGAAGAATTTGAGGCGGAAGGAACACGCAGAAAAAGGGAGGAATTTGATCATTTAAGAGAATACTGCTCAAGCCCAGAATGTGACAGTTGGAGATTGATATCTAAACTTAAGGATCCTAAGAGGTTCGCCATTTTTATGGAAACTGGGATGGATATCAGTACAGAGGAAAGGGATGCGTATGATCGATGGGAGGATACTACCTCACGTGATTGGTTTACAAGCGATGAGGATGAAACATTAAATGAATCTCAGGAAGAGAAGACACCCGATATCACAGGATGTACAGATGTAGTGGATACTCAATGATATTACACAAGCCTGCAGAAGATATATTTTCATATGAATATATGCTATTTGTTACTTTTGCATTGTTAGAACATCAAGCATTTTACCGTAGTGACATTTCAGTAATCTTAAGTACCATGGTAATTTAATGCGTTAATAAGGATGTTTCGTCAATGAGAAAAAATAAATACGAGTTGTATTTATGTTTGTATTTCCGTGAATGTAATTACAGCCAGCTCTGATCAAAACTTTTGAAAGAAAATAAAACGGACAAGCAAACAAATTCCAAATTCTCGTATTTATTTTCCATAATTTAGGCGATTTTTACTAAATGGATGTAAAACGCAAACGTAAATAGCATAAACCCTTTATCGTTTTCAGTTAACTATTATTGTTATTCGATTCATACCGATTGTTAATTTTGTGAACTCAGGAACCAAGTTAATTCGGCGAGCTTTTCTACTCGTCGTGGAAAAAACGAAATGTTGTCCA

Protein

Uniprot

Uniprot term	Description
B9X187	Nuclear envelope integral membrane protein 1a OS=Xenopus laevis OX=8355 GN=nemp1a PE=1 SV=1
E7FE40	Nuclear envelope integral membrane protein 1 OS=Danio rerio OX=7955 GN=nemp1 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10225	NEMP	NEMP family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019358	Family	NEMP family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13598	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005635	Cellular Component	nuclear envelope	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K27355	NEMP, TMEM194; nuclear envelope integral membrane protein	-	Structural proteins	-	deepkoala