Genomic Location: scaffold27:2668932...2698494
NR annotation: CAB4004348.1, Retrovirus-related Pol poly from transposon [Paramuricea clavata]
| CDS | ||||
| scaffold27.g72.t1 | ||||
| Transcript |
| scaffold27.g72.t1 |
| Protein |
| scaffold27.g72.t1 |
| Uniprot term | Description |
|---|---|
| P07742 | Ribonucleoside-diphosphate reductase large subunit OS=Mus musculus OX=10090 GN=Rrm1 PE=1 SV=2 |
| P23921 | Ribonucleoside-diphosphate reductase large subunit OS=Homo sapiens OX=9606 GN=RRM1 PE=1 SV=1 |
| Q5R919 | Ribonucleoside-diphosphate reductase large subunit OS=Pongo abelii OX=9601 GN=RRM1 PE=2 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03477 | ATP-cone | ATP cone domain | Domain | Interproscan |
| PF17917 | RT_RNaseH | RNase H-like domain found in reverse transcriptase | Domain | Interproscan |
| PF00665 | rve | Integrase core domain | Domain | Interproscan |
| PF00317 | Ribonuc_red_lgN | Ribonucleotide reductase, all-alpha domain | Domain | Interproscan |
| PF00078 | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Domain | Interproscan |
| PF02867 | Ribonuc_red_lgC | Ribonucleotide reductase, barrel domain | Family | Interproscan |
| PF13650 | Asp_protease_2 | Aspartyl protease | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR005144 | Domain | ATP-cone domain | Interproscan |
| IPR000477 | Domain | Reverse transcriptase domain | Interproscan |
| IPR041373 | Domain | Reverse transcriptase, RNase H-like domain | Interproscan |
| IPR001584 | Domain | Integrase, catalytic core | Interproscan |
| IPR013509 | Domain | Ribonucleotide reductase large subunit, N-terminal | Interproscan |
| IPR021109 | Homologous_superfamily | Aspartic peptidase domain superfamily | Interproscan |
| IPR043128 | Homologous_superfamily | Reverse transcriptase/Diguanylate cyclase domain | Interproscan |
| IPR043502 | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR039718 | Family | Ribonucleoside-diphosphate reductase large subunit | Interproscan |
| IPR000788 | Domain | Ribonucleotide reductase large subunit, C-terminal | Interproscan |
| IPR012337 | Homologous_superfamily | Ribonuclease H-like superfamily | Interproscan |
| IPR008926 | Homologous_superfamily | Ribonucleotide reductase R1 subunit, N-terminal | Interproscan |
| IPR036397 | Homologous_superfamily | Ribonuclease H superfamily | Interproscan |
| IPR013346 | Domain | Ribonucleotide reductase, class I, alpha subunit, C-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11573 | RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE CHAIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0015074 | Biological Process | DNA integration | Interproscan |
| GO:0004748 | Molecular Function | ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0009263 | Biological Process | deoxyribonucleotide biosynthetic process | Interproscan |
| GO:0005971 | Cellular Component | ribonucleoside-diphosphate reductase complex | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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