Detailed information of scaffold27.g72.t3 in Morbakka virulenta

Genomic Location: scaffold27:2668932...2690784
NR annotation: CAB4004348.1, Retrovirus-related Pol poly from transposon [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P07742Ribonucleoside-diphosphate reductase large subunit OS=Mus musculus OX=10090 GN=Rrm1 PE=1 SV=2
P23921Ribonucleoside-diphosphate reductase large subunit OS=Homo sapiens OX=9606 GN=RRM1 PE=1 SV=1
P79732Ribonucleoside-diphosphate reductase large subunit OS=Danio rerio OX=7955 GN=rrm1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03477ATP-coneATP cone domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF13650Asp_protease_2Aspartyl proteaseDomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF02867Ribonuc_red_lgCRibonucleotide reductase, barrel domainFamilyInterproscan
PF00317Ribonuc_red_lgNRibonucleotide reductase, all-alpha domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039718FamilyRibonucleoside-diphosphate reductase large subunitInterproscan
IPR005144DomainATP-cone domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR008926Homologous_superfamilyRibonucleotide reductase R1 subunit, N-terminalInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR013346DomainRibonucleotide reductase, class I, alpha subunit, C-terminalInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR000788DomainRibonucleotide reductase large subunit, C-terminalInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR013509DomainRibonucleotide reductase large subunit, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11573RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE CHAINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004748Molecular Functionribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptorInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005971Cellular Componentribonucleoside-diphosphate reductase complexInterproscan
GO:0009263Biological Processdeoxyribonucleotide biosynthetic processInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

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