Detailed information of scaffold284.g7.t4 in Morbakka virulenta

Genomic Location: scaffold284:393478...455045
NR annotation: XP_047143761.1, gem-associated protein 5 isoform X2 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q8BX17Gem-associated protein 5 OS=Mus musculus OX=10090 GN=Gemin5 PE=1 SV=2
Q8R537Peroxisomal targeting signal 2 receptor OS=Cricetulus griseus OX=10029 GN=PEX7 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR052640FamilyWD repeat domain-containing protein Gemin-5Interproscan
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46362GEM-ASSOCIATED PROTEIN 5Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000387Biological Processspliceosomal snRNP assemblyInterproscan
GO:0003730Molecular FunctionmRNA 3'-UTR bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0032797Cellular ComponentSMN complexInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13133GEMIN5; gem associated protein 5-Spliceosomeko03041deepkoala

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