Detailed information of scaffold290.g2.t2 in Morbakka virulenta

Genomic Location: scaffold290:26503...69415
NR annotation: KAJ8382490.1, hypothetical protein SKAU_G00032680 [Synaphobranchus kaupii]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A5A779Geranylgeranyl transferase type-2 subunit alpha OS=Sus scrofa OX=9823 GN=RABGGTA PE=2 SV=1
Q08602Geranylgeranyl transferase type-2 subunit alpha OS=Rattus norvegicus OX=10116 GN=Rabggta PE=1 SV=1
Q9JHK4Geranylgeranyl transferase type-2 subunit alpha OS=Mus musculus OX=10090 GN=Rabggta PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF01239PPTAProtein prenyltransferase alpha subunit repeatRepeatInterproscan
PF14580LRR_9Leucine-rich repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002088RepeatProtein prenyltransferase, alpha subunitInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008318Molecular Functionprotein prenyltransferase activityInterproscan
GO:0018342Biological Processprotein prenylationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14050RABGGTA; geranylgeranyl transferase type-2 subunit alphaEC:2.5.1.60
Membrane traffickingko04131deepkoala

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