Gene detail

Detailed information of scaffold291.g8.t1 in Morbakka virulenta

Genomic Location: scaffold291:372776...439112
NR annotation: XP_005999060.1, PREDICTED: protein-glutamine gamma-glutamyltransferase 4 [Latimeria chalumnae]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

scaffold291.g8.t1

GTATACTTTCACTTTTATTTTGTCATATTATTGATGCTTGGAGGTGGAAAAAAATGGGAGAACTACCAATATCTTACATAGACATTAACAAAAACAAAAATGGACGCGATCACCATACAAGTCGTTTTCATGGACCAGCATTGATACTGCGACGTGGACAACCTTTTATCCTTGATATCTTCACAAAGGAAAAGTACAACAGTGAAAATCATGCATTTCAGCTACACTTAGCAACTGGATCGAAACCTAAACAGTTTGATAGAACAAAAATAATTGTGAGGCTGAGAGAAGGCATTAATTCTCAAAAATGGGGTATGGCCATACAGGAAAAGTCAGCAGAAAAAATCAGAGTAAAAGTAAGCATACCTCCTGATACCATTGTTTCAAATTATAGGCTAACGATAGAAGGCAATGGAAATTTGCTGTATACACACGAGGAGCCAGTGTACATTTTATTTAATCCTTGGTGTGAAGATGATGAAGTTTATATGCCTGACAAAGAATGGTTAGAAGAGTATATATTAAATGACCAAGGCGTATTATTTCAAGGAACGGAACACAATATTTTGCCATTTCGCTGGTACTATGGTCAGTTTGAAAAGGTGGCTCTTGAAGCTGCGTTTGAAATATTGAGATTTACAAAATTTAGAGAAAGAGACACTGCCAGAGAAGTGGCAAGGCGAGTCTCAGCAAAGGTTAACGCCAATGACGATGGAGGTATATTAGTGGGTAATTGGAACGGTGAATACAGCGATGGAGTAGAGCCTTGGGCATGGACAGGAAGCCCGGAAATCCTGGAGTCTTATTTGAAAACAAGAAAACCAGTAAAATATGGCCAATGTTGGGGCTTCTGTGGATTATCGACAACAATCCTTAGAGCACTTGGAATTCCAACAAGATCGATCAGTAATTTTAACTCTGCTCACGACACTGACAAAAATTGTTCATATGATCGGTACTATGATGAAAATGGTGAATATTTAAATGAAATGTCTGGTGATTCTACATGGAATTTTCATTGCTGGAATGATTCCTGGATGTCTCGACCAGACCTTGATAGAGGTTATGGTGGATGGCAAGCTGTTGATGCGACTCCGCAAGAAAGAAGTAAAGACTCATATCAAGTAGTAACATTCGATAGCAGTAGCTACCTGCGCTTTCTTAAAGACAATCCCATGGTACGAATTCATTGCCTGTTCCTAGTTAAAGAGACTGAGCAAACTTTTGTTACTGAGAAGATTGTCACCATTAATCGACCAGAATTAAGCATTAAAGGCATTCCATCACATTGGCGAGTGGGAAAAGCATTGTCTTTTTATGTCAGTTTTCGAAATCCGCTGAGAAAAACTCTTAGAAACTGTGTTCTGAGAGTTGATGGGAATTTGATGGAAGGAAGATTTATGCTTCCACAGAGAGATATTTATGGTGGTGAAATTTTGCAGATGCCAGTAACTATCATTCCAGAGACGCTTCCAGGTGAAAAATATTGCGTACCTTACCAGACATCTTGCAAGAGAAACCAATgtttgaacacttacgactcgtGGCGAAATGGAAAGAAGCTTAACTATTGGGGAGGTGGTAATCCAGCTATTGGTGGATGCAAATGTTGGGAAGACCAGTCTTGCGTTCAAAGCTTAAAAAATCGAGACTGTCATGCCAAAGACAATAACCTGTGTGAGGATCAAGGCTACGTTAATATCAAGGCAGACCTTCCAATAACTGGTGGGTACTTTGGAGACCTGGACACGTCAAAAAAACATATGACTTTGACTGTAGGAAGACTTGAATGCTTTAACTAATATACAGGGAGCAACTGTTTTTGTACAACTGTAGTCATACAGTTTTCCTGTTTACTAAATAAAATAAGAAGCACTGCGGGATCATACACATTAAGAACCAAAAAGTAACCTTGACGTGTTTGCAAATAACAGTAGATTTCGTTGACACTTTATATCAATACACAGAAGCATATTAAATGTAAAATGTGCTTGTGCTAATAATTTAATATTGGAAATATTTATCTTAaagaaaacatattatttatttcctaaactactgttaaatcaagaacatgcttaatattaattcgaggttttttccaccagaagaagtgaaaacaggaggacgatcaatgtactgctgtgtacctgaatgtggaagttctttttataatagtaagaaggaaaaaacaaatattgcactattttcttttcctaataaagataccaaaccagatcttcataaagcttggagtaaagaaatattacaatatagaaggaaaggaggtgctgataaatttgaaatcaacaagtatactaaagtatgccagttgcattttaagccagaggaaataaaagttagcatgggtcgcggtattaaaactttgaaacctggggccattccaagtgtatttacctttaaaaagccaagattaagtaaatctagaaagtcgccattaaaaagacaaaaactatttgttactccctctgaggaagaaggacttgataatgaagcagtaggtgaacaacttgattttcaagaagaaaaatgtagcagttgtgaaaggttaaaatcagaaaaattacttattcaaaaaaagtttgaacaatgcg

Protein

Uniprot

Uniprot term	Description
P22758	Protein-glutamine gamma-glutamyltransferase K OS=Oryctolagus cuniculus OX=9986 GN=TGM1 PE=2 SV=2
P49221	Protein-glutamine gamma-glutamyltransferase 4 OS=Homo sapiens OX=9606 GN=TGM4 PE=1 SV=2
P22735	Protein-glutamine gamma-glutamyltransferase K OS=Homo sapiens OX=9606 GN=TGM1 PE=1 SV=4

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00868	Transglut_N	Transglutaminase family	Domain	Interproscan
PF01841	Transglut_core	Transglutaminase-like superfamily	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038765	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan
IPR014756	Homologous_superfamily	Immunoglobulin E-set	Interproscan
IPR023608	Family	Protein-glutamine gamma-glutamyltransferase, animal	Interproscan
IPR001102	Domain	Transglutaminase, N-terminal	Interproscan
IPR002931	Domain	Transglutaminase-like	Interproscan
IPR050779	Family	Protein-glutamine gamma-glutamyltransferases	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR036985	Homologous_superfamily	Transglutaminase-like superfamily	Interproscan
IPR036238	Homologous_superfamily	Transglutaminase, C-terminal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11590	PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003810	Molecular Function	protein-glutamine gamma-glutamyltransferase activity	Interproscan
GO:0018149	Biological Process	peptide cross-linking	Interproscan