Gene detail

Detailed information of scaffold292.g6.t1 in Morbakka virulenta

Genomic Location: scaffold292:120318...169485
NR annotation: XP_052040237.1, tumor necrosis factor receptor superfamily member 5 isoform X2 [Apodemus sylvaticus]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P25119	Tumor necrosis factor receptor superfamily member 1B OS=Mus musculus OX=10090 GN=Tnfrsf1b PE=2 SV=1
Q7YRL5	Tumor necrosis factor receptor superfamily member 5 OS=Canis lupus familiaris OX=9615 GN=CD40 PE=2 SV=1
Q3LRP1	Tumor necrosis factor receptor superfamily member 5 OS=Callithrix jacchus OX=9483 GN=CD40 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00020	TNFR_c6	TNFR/NGFR cysteine-rich region	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR052302	Family	Neurotrophin receptor-related death domain-containing protein	Interproscan
IPR001368	Domain	TNFR/NGFR cysteine-rich region	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46605	TUMOR NECROSIS FACTOR RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005035	Molecular Function	death receptor activity	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0007266	Biological Process	Rho protein signal transduction	Interproscan
GO:0009986	Cellular Component	cell surface	Interproscan
GO:0015026	Molecular Function	coreceptor activity	Interproscan
GO:0048406	Molecular Function	nerve growth factor binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan