Detailed information of scaffold3.g125.t4 in Morbakka virulenta

Genomic Location: scaffold3:5428536...5503005
NR annotation: CAH3166915.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9DBR15'-3' exoribonuclease 2 OS=Mus musculus OX=10090 GN=Xrn2 PE=1 SV=1
Q9H0D65'-3' exoribonuclease 2 OS=Homo sapiens OX=9606 GN=XRN2 PE=1 SV=1
Q5R4L55'-3' exoribonuclease 2 OS=Pongo abelii OX=9601 GN=XRN2 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17846XRN_MXrn1 helical domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR041412DomainXrn1, helical domainInterproscan
IPR027073Family5'-3' exoribonucleaseInterproscan
IPR017151Family5'-3' exoribonuclease type 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR123415'->3' EXORIBONUCLEASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004534Molecular Function5'-3' RNA exonuclease activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006139Biological Processnucleobase-containing compound metabolic processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12619XRN2, RAT1; 5'-3' exoribonuclease 2EC:3.1.13.-
Transfer RNA biogenesisko03016deepkoala

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