Gene detail

Detailed information of scaffold3.g221.t2 in Aurelia aurita

Genomic Location: scaffold3:3176892...3188456
NR annotation: no NCBI-NR hit recorded
Species Aurelia aurita · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

scaffold3.g221.t2

cgtgactcctgcaaggacgtcataacttgcggcttgatctggattagatgtcgtcaaaaatatccctggatttatgtttattttgaatttaggtattgtatttgaagctgagttgaagatggaaggatgtcagaagatatcagaagctaaataaaggagctgtgcagtgtttgttgatcatagctgtgggaaaagttatttaggcccaaaaaggccggtcgtctggtcgtcaagacagcgtcactccaccgcgcacctgtgttatgattttgttcattttgaatgctgaaatgcatctccttgccacctacagcgtctgggcgtacctatctaaagcattttaagacgaagtatacaaagaaaggaagcaaagaggactgattttatttgcaaaagttggattattttgatgcagtatggacttcgatgcggaaatcactaaagatgaacctcaaggattttatcagcagtacgagccaaaagaaacgcttgggagccagaaaatattttatttgattctgagaatagagtgatggtaacagattttgggtttgctgtcattctcgcagaaaatgaaacagttcgagagttttgtggcacttatggctaccttgctccagaaacattgaagtgctgcatgtatgaaaacatgcctggttatggtcgagaggttgacttatgggcttgcggagtcatattatatacattattagttggatttgcaccattttggcatcgaaagcaaatcacaatgataaagaatataacaaaaggacaatacaaatttggtagtccggaatgggatgatatttcagaattaccgaaagatcttatacgaaaattgctggtggtcgatccaaagcaaaggattacagccgaacaagcattatcgcatccttggtttgaaggcctagcgacaccgagaccaaagacaacaagaagattcaaagctgttgttgtggcaattatcacaatgaaagaactctattatacatatcacaaacgtcaccagcccgctacgaaggagactgttgtcaaggacccatacggacataaaccagtgcgcaggatgatcgacagttgcgcgttcaaaatgtattctcattgggttaaacgatggcctgatcaagatcaaaacagggcagcgttgtttcaaaatacagcgaaacgagagccaaccggattgggtaaagtaaacatatcttctgtgttgtatccgttaaatagcccttggattaagaaagctagtagttatcgaacgttatctgaggccattaaaaagcgagaaaatagttataatgggcgtagttagcctaatgttagagcacagggaacccagctcatatagtgctccacttcagtatccaattctttacatacacgaaacggaggagcaaacaccagagtatgaacttggcagcaagggagagttttgtaaattaatgaaatctggtcccggtatgccaaagcgacttgtggttctcaataatagaatttaagactctgagtccaccaatcagatcaaaataaatagataggagcaacgccttatggttggctgcgctaaaggtgtgaaatctattcttgagtccttcagatcgatctatcttttcatccattttacaaaattgtcccttactgctaactgagctgtatggaatattattttgttcgtaatatgattttgttacgatatttagaaaggcgacagtagatatttataccgatacgagtatggatgagaattccccgtgatgccctggaatgcagcagatgaagttaatacggattccccattccttaaagggaatagaagcatatatcagtggctccgagccacaaggctttaactgtcaatcaaatcttaaccaatcacaagcagctatctaccatttcacgtgatcactttcactgcagcccgtaacgcgcgatcagtaatggcggtggaagttgttgctccacccccactaaggtgcnctttggctaaaatgtgataatttgtaaaatactattgctcaaaaaaggtttgtcatgatgcaatttcatcatctctctcccgaaagaatgaaataacaatcatctattaaatttatttggtccttcacataaatacacaaaaagaaaatttaaagattggcaacatatcaaatgttgatgatttttcaacaagtttcacttttttgtgggtcacccggtaaatggtgtcaagcgttatgttcctgaccctttttttggtcaaagggactcaaatcctcattgaagcaaatgcagatttaggtcgttttgacctgaaaagagtttagtctgtcaagaaactcttttgccacattttaaacgatttaccgaatgacgcaaaattaaatcctctattttgaaaatcaaattgaacaagggattttttggattaagtcctgaatctgtaacgtttttagaagaaggtaaaagcggggagcttgaaattgcctaagagtttattcagactaatatataggaacgatatattcttttttaatggccccagcaaacaagatgctgttgcaagaacaagctgttttaaaattacttcgataaacagaagcgttaggcccacaattgagagctttgcccatgaataaagcattaaagtttaaagacactgcgcttatttcaagaaaaagacgtgccgaatgatgcttggtaagctcaagtaagcttgaaaggaccaaacaggcaaatctttttgcgactcaaaatctcaaatatttgtccaaagaagtttcctcgtttatctaaggctaaaaacaaggatcctattcgcgaactttcctgtcttgttttctgtaatgggcctatttgtgtaggggatttataatcctgtatatttatatagatgttgagtttttaacggttataacaagggcgcctaccttgtatgaattgggtttattcgcagtcctgttttcgtgacatagtacaattttcaaattctaacgtctatcagtgttgaccaatagaaattcgcgctgtctggttccctgtggacagctcttataacagttgatgtcgtattgcataaacacctgaatctgaaaccacaaaattatcttgcgtcatcttacgtctacgggttcggataaaacaactacaatacagcaattgctctatgtactatgtcacgaaaacagaacttagaatagacccaattcatacaa

Transcript

scaffold3.g221.t2

CGTGACTCCTGCAAGGACGTCATAACTTGCGGCTTGATCTGGATTAGATGTCGTCAAAAATATCCCTGGATTTATGTTTATTTTGAATTTAGGTATTGTATTTGAAGCTGAGTTGAAGATGGAAGGATGTCAGAAGATATCAGAAGCTAAATAAAGGAGCTGTGCAGTGTTTGTTGATCATAGCTGTGGGAAAAGTTATTTAGGCCCAAAAAGGCCGGTCGTCTGGTCGTCAAGACAGCGTCACTCCACCGCGCACCTGTGTTATGATTTTGTTCATTTTGAATGCTGAAATGCATCTCCTTGCCACCTACAGCGTCTGGGCGTACCTATCTAAAGCATTTTAAGACGAAGTATACAAAGAAAGGAAGCAAAGAGGACTGATTTTATTTGCAAAAGTTGGATTATTTTGATGCAGTATGGACTTCGATGCGGAAATCACTAAAGATGAACCTCAAGGATTTTATCAGCAGTACGAGCCAAAAGAAACGCTTGGGAGCCAGAAAATATTTTATTTGATTCTGAGAATAGAGTGATGGTAACAGATTTTGGGTTTGCTGTCATTCTCGCAGAAAATGAAACAGTTCGAGAGTTTTGTGGCACTTATGGCTACCTTGCTCCAGAAACATTGAAGTGCTGCATGTATGAAAACATGCCTGGTTATGGTCGAGAGGTTGACTTATGGGCTTGCGGAGTCATATTATATACATTATTAGTTGGATTTGCACCATTTTGGCATCGAAAGCAAATCACAATGATAAAGAATATAACAAAAGGACAATACAAATTTGGTAGTCCGGAATGGGATGATATTTCAGAATTACCGAAAGATCTTATACGAAAATTGCTGGTGGTCGATCCAAAGCAAAGGATTACAGCCGAACAAGCATTATCGCATCCTTGGTTTGAAGGCCTAGCGACACCGAGACCAAAGACAACAAGAAGATTCAAAGCTGTTGTTGTGGCAATTATCACAATGAAAGAACTCTATTATACATATCACAAACGTCACCAGCCCGCTACGAAGGAGACTGTTGTCAAGGACCCATACGGACATAAACCAGTGCGCAGGATGATCGACAGTTGCGCGTTCAAAATGTATTCTCATTGGGTTAAACGATGGCCTGATCAAGATCAAAACAGGGCAGCGTTGTTTCAAAATACAGCGAAACGAGAGCCAACCGGATTGGGTAAAGTAAACATATCTTCTGTGTTGTATCCGTTAAATAGCCCTTGGATTAAGAAAGCTAGTAGTTATCGAACGTTATCTGAGGCCATTAAAAAGCGAGAAAATAGTTATAATGGGCGTAGTTAGCCTAATGTTAGAGCACAGGGAACCCAGCTCATATAGTGCTCCACTTCAGTATCCAATTCTTTACATACACGAAACGGAGGAGCAAACACCAGAGTATGAACTTGGCagcaagggagagttttgtaaattaatgaaatctggtcccggtatgccaaagcgacttgtggttctcaataatagaatttaagactctgagtccaccaatcagatcaaaataaatagataggagcaacgccttatggttggctgcgctaaaggtgtgaaatctattcttgagtccttcagatcgatctatcttttcatccattttacaaaattgtcccttactGCTAACTGAGCTGTATGGAATATTATTTTGTTCGTAATATGATTTTGTTACGATATTTAGAAAGGCGACAGTAGATATTTATACCGATACGAGTATGGATGAGAATTCCCCGTGATGCCCTGGAATGCAGCAGATGAAGTTAATACGGATTCCCCATTCCTTAAAGGGAatagaagcatatatcagtggctccgagccacaaggctttaactgtcaatcaaatcttaaccaatcacaagcagctatctaccatttcacgtgatcactttcactgcagcccgtaacgcgcgatcagtaatggcggtggaagttgttgctccacccccactaaggtgcnctttggctaaaatgtgataatttgtaaaatactattgctcaaaaaaggtttgtcatgatgcaatttcatcatctctctcccgaaagaatgaaataacaatcatctattaaatttatttggtccttcacataaatacacaaaaagaaaatttaaagattggcaacatatcaaatgttgatgatttttcaacaagtttcacttttttgtgggtcacccggtaAATGGTGTCAAGCGTTATGTTCCTGACCCTTTTTTTGGTCAAAGGGACTCAAATCCTCATTGAAGCAAATGCAGATTTAGGTCGTTTTGACCTGAAAAGAGTTTAGTCTGTCAAGAAACTCTTTTGCCACATTTTAAACGATTTACCGAATGACGCAAAATTAAATCCTCTATTTTGAAAATCAAATTGAACAAGGGATTTTTTGGATTAAGTCCTGAATCTGTAACGTTTTTAGAAGAAGGTAAAAGCGGGGAGCTTGAAATTGCCTAAGAGTTTATTCAGACTAATATATAGGAACGATATATTCTTTTTTAATGGCCCCAGCAAACAAGATGCTGTTGCAAGAACAAGCTGTTTTAAAATTACTTCGATAAACAGAAGCGTTAGGCCCACAATTGAGAGCTTTGCCCATGAATAAAGCATTAAAGTTTAAAGACACTGCGCTTATTTCAAGAAAAAGACGTGCCGAATGATGCTTGGTAAGCTCAAGTAAGCTTGAAAGGACCAAACAGGCAAATCTTTTTGCGACTCAAAATCTCAAATATTTGTCCAAAGAAGTTTCCTCGTTTATCTAAGGCTAAAAACAAGGATCCTATTCGCGAACTTTCCTGTCTTGTTTTCTGTAATGGGCCTATTTGTGTAGGGGATTTATAATCCTGTATATTTATATAGATGTTGAGTTTTTAACGGTTATAAcaagggcgcctaccttgtatgaattgggtttattcgcagtcctgttttcgtgacatagtacaattttcaaattctaacgtctatcagtgttgaccaatagaaattcgcgctgtctggttccctgtggacagctcttataacagttgatgtcgtattgcataaacacctgaatctgaaaccacaaaattatcttgcgtcatcttacgtctacgggttcggataaaacaactacaatacagcaattgctctatgtactatgtcacgaaaacagaacttagaatagacccaattcatacaa

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002291 all species →	Family	Phosphorylase kinase, gamma catalytic subunit	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24347 all species →	SERINE/THREONINE-PROTEIN KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004689 all species →	Molecular Function	phosphorylase kinase activity	Interproscan
GO:0005516 all species →	Molecular Function	calmodulin binding	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0005964 all species →	Cellular Component	phosphorylase kinase complex	Interproscan
GO:0005978 all species →	Biological Process	glycogen biosynthetic process	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for scaffold3.g221.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.