Gene detail

Detailed information of scaffold3.g245.t3 in Aurelia aurita

Genomic Location: scaffold3:3492002...3500783
NR annotation: no NCBI-NR hit recorded
Species abbreviation AAURI1 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

scaffold3.g245.t3

ggaatagaaatcgacgtcataacgaggtatttaaacaatggtaccaggggattgtaatcattacaagatggccaccgcagcagaaagtcctcgatcatttggcagcataaagacctatccaataagtcaagactacaatgtccattggaacaagaaactcggctctggtataagtggacctgtcaggatctgcacacacaaagttacaaggcaacattttgcattgaaatgtcttgttgacagacaaaaatcaagaactgaggtagaattgcacttcagatgcaaccacccaaatattgtctcagttgctgatgtctatgctaatgaaataactttgcctggtgaagtgctgtccaagtcttatttactcatggtgatggagctaatggagggtggagaactctttgaaagaataaggaaaaaagtcagttttactgaaaaagaagcttgtgacattacaaaacagattgcttctggccttaaccatgttcatcaacaaaacattgcccatcgagatctcaaacctgaaaacttgttactgaaaagcaaagttgaggccgcgtctgtcaaaatagctgattttggttttgcaaaggaagacaagggagatttgatgacacctcagtttacgccttactatgtctcaccacaggtactggaggctcaaaagttccacaaagctcagaaaatgggacatattgcacctgggagccctccttatacatacagcaagagttgtgatatgtggtccttaggagtgataatttacatcatgctatgtggatatccaccattttattcggagaatcctcgcaagcaattatcacaaggaatgcgaagaagaattatggctggtgaatatgatttccctcctcatgaatgggcgagagtttcagatttggctaaagatgtgagttgtgatatgtggtccttaggagtgataatttacatcatgctatgtggatatccaccattttattcggagaatcctcgcaagcaattatcacaaggaatgcgaagaagaattatggctggtgaatatgatttccctcctcatgaatgggcgagagtttcagatttggctaaagatgtggttaggaggtaattttaatcatctttctcacatttatataaagttagcgtgcgttgcagtctttgtcagagaaaaatgaattctgatcttgcgtaagagaaaatgaattccgttcaggacatttgaaaagtacacaaagttgccaaataggagatagggcgttaaatgaatgctgcagggagccctctgtctcactcaggtcattcttgaattttaaatttgcgttactcttgagaaaatccagatccttttttcgagaaactcgttcgaagtttaaaaattttcaaacacttaagtttgttgttgactttatctatcataaaagtttatcgcatcaaggcagttcaatatgcaggagaaatggggtaatttgctacaagtttgctacagttaggaattgcatgctctatgataactccggcgattcatttcacgagcaatctttgttctggttttcgtctaataaagacaaacagttgcaactaaatttgtgtatctttagttaattcttaaaacttgacattttagccacacaataatcatcatgttgaagaaatctgatatgaaaattacgaaaacgttgggctcagaacggattttttttactcacccggtttataactttcagtatttttccctgtgtttcaaagaagcacttttaatggttgttcgtcttgaatcatttctgtcgacgtgttaggccttctggtttgttttctggaacttgtttattaatgtcagcctcacatattgaatgtttctcaaagtaaacacaacagcatcacatgattgcttgataataacatgacccagaaacgtcacgtcagatgtagaaagagaaattcattgtatccggattgctgtcaactcttcgtttgttttcccgccaaaacatttgtgtttaaagtagctaggacaagtgagttccacgcagaggctttgtgctgcagtaaacatggcatcgattcattttacggtttagtgcatagaagcaactagaaagaacgttgtacttctttacgctgctgcatcctctcttctagtagtccactacatgcttttttggtaagcagggcatgaaaaataacttttttcattgacatgattttgatcttcttaggctcatcaatgtgaatcaagaagaaagaatgacaattcaacaattacttgtacatccttggcttaaccatggcaaagcaccagatactcctctccagtctccacatcatttgatggacgaggttgttggctatttttttattatcttcccttgtttattttgcatcttttgtataccggtagacttaggaacaattacttgaaacagaaatgtcttgcaaacgttttatgaaacaataaacgagatagcccagctagccacgatgttaaaacttacgtcacaatttttcagttgggctaaaaaaaattatgtaattcgtagctaacggtcatagaaacaacccaccctaatgacgtaattaaaagcaagaaagaacagagaattgacaataaggggtcgctttccaagaaaacgtatgtttgaagctgagaattgattccagtgaagtcatttaaattaccgcctgttgtttcaaaagattttggaaaatcattttgagataaatcaatcaatcaatc

Transcript

scaffold3.g245.t3

GGAATAGAAATCGACGTCATAACGAGGTATTTAAACAATGGTACCAGGGGATTGTAATCATTACAAGATGGCCACCGCAGCAGAAAGTCCTCGATCATTTGGCAGCATAAAGACCTATCCAATAAGTCAAGACTACAATGTCCATTGGAACAAGAAACTCGGCTCTGGTATAAGTGGACCTGTCAGGATCTGCACACACAAAGTTACAAGGCAACATTTTGCATTGAAATGTCTTGTTGACAGACAAAAATCAAGAACTGAGGTAGAATTGCACTTCAGATGCAACCACCCAAATATTGTCTCAGTTGCTGATGTCTATGCTAATGAAATAACTTTGCCTGGTGAAGTGCTGTCCAAGTCTTATTTACTCATGGTGATGGAGCTAATGGAGGGTGGAGAACTCTTTGAAAGAATAAGGAAAAAAGTCAGTTTTACTGAAAAAGAAGCTTGTGACATTACAAAACAGATTGCTTCTGGCCTTAACCATGTTCATCAACAAAACATTGCCCATCGAGATCTCAAACCTGAAAACTTGTTACTGAAAAGCAAAGTTGAGGCCGCGTCTGTCAAAATAGCTGATTTTGGTTTTGCAAAGGAAGACAAGGGAGATTTGATGACACCTCAGTTTACGCCTTACTATGTCTCACCACAGGTACTGGAGGCTCAAAAGTTCCACAAAGCTCAGAAAATGGGACATATTGCACCTGGGAGCCCTCCTTATACATACAGCAAGAGTTGTGATATGTGGTCCTTAGGAGTGATAATTTACATCATGCTATGTGGATATCCACCATTTTATTCGGAGAATCCTCGCAAGCAATTATCACAAGGAATGCGAAGAAGAATTATGGCTGGTGAATATGATTTCCCTCCTCATGAATGGGCGAGAGTTTCAGATTTGGCTAAAGATGTGAGTTGTGATATGTGGTCCTTAGGAGTGATAATTTACATCATGCTATGTGGATATCCACCATTTTATTCGGAGAATCCTCGCAAGCAATTATCACAAGGAATGCGAAGAAGAATTATGGCTGGTGAATATGATTTCCCTCCTCATGAATGGGCGAGAGTTTCAGATTTGGCTAAAGATGTGGTTAGGAGGTAATTTTAATCATCTTTCTCACATTTATATAAAGTTAGCGTGCGTTGCAGTCTTTGTCAGAGAAAAATGAATTCTGATCTTGCGTAAGAGAAAATGAATTCCGTTCAGGACATTTGAAAAGTACACAAAGTTGCCAAATAGGAGATAGGGCGTTAAATGAATGCTGCAGGGAGCCCTCTGTCTCACTCAGGTCATTCTTGAATTTTAAATTTGCGTTACTCTTGAGAAAATCCAGATCCTTTTTTCGAGAAACTCGTTCGAAGTTTAAAAATTTTCAAACACTTAAGTTTGTTGTTGACTTTATCTATCATAAAAGTTTATCGCATCAAGGCAGTTCAATATGCAGGAGAAATGGGGTAATTTGCTACAAGTTTGCTACAGTTAGGAATTGCATGCTCTATGATAACTCCGGCGATTCATTTCACGAGCAATCTTTGTTCTGGTTTTCGTCTAATAAAGACAAACAGTTGCAACTAAATTTGTGTATCTTTAGTTAATTCTTAAAACTTGACATTTTAGCCACACAATAATCATCATGTTGAAGAAATCTGATATGAAAATTACGAAAACGTTGGGCTCAGAACGGATTTTTTTTACTCACCCGGTTTATAACTTTCAGTATTTTTCCCTGTGTTTCAAAGAAGCACTTTTAATGGTTGTTCGTCTTGAATCATTTCTGTCGACGTGTTAGGCCTTCTGGTTTGTTTTCTGGAACTTGTTTATTAATGTCAGCCTCACATATTGAATGTTTCTCAAAGTAAACACAACAGCATCACATGATTGCTTGATAATAACATGACCCAGAAACGTCACGTCAGATGTAGAAAGAGAAATTCATTGTATCCGGATTGCTGTCAACTCTTCGTTTGTTTTCCCGCCAAAACATTTGTGTTTAAAGTAGCTAGGACAAGTGAGTTCCACGCAGAGGCTTTGTGCTGCAGTAAACATGGCATCGATTCATTTTACGGTTTAGTGCATAGAAGCAACTAGAAAGAACGTTGTACTTCTTTACGCTGCTGCATCCTCTCTTCTAGTAGTCCACTACATGCTTTTTTGGTAAGCAGGGCATGAAAAATAACTTTTTTCATTGACATGATTTTGATCTTCTTAGGCTCATCAATGTGAATCAAGAAGAAAGAATGACAATTCAACAATTACTTGTACATCCTTGGCTTAACCATGGCAAAGCACCAGATACTCCTCTCCAGTCTCCACATCATTTGATGGACGAGGTTGTTGGCTATTTTTTTATTATCTTCCCTTGTTTATTTTGCATCTTTTGTATACCGGTAGACTTAGGAACAATTACTTGAAACAGAAATGTCTTGCAAACGTTTTATGAAACAATAAACGAGATAGCCCAGCTAGCCACGATGTTAAAACTTACGTCACAATTTTTCAGTTGGGCTAAAAAAAATTATGTAATTCGTAGCTAACGGTCATAGAAACAACCCACCCTAATGACGTAATTAAAAGCAAGAAAGAACAGAGAATTGACAATAAGGGGTCGCTTTCCAAGAAAACGTATGTTTGAAGCTGAGAATTGATTCCAGTGAAGTCATTTAAATTACCGCCTGTTGTTTCAAAAGATTTTGGAAAATCATTTTGAGataaatcaatcaatcaatc

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24347 all species →	SERINE/THREONINE-PROTEIN KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K04442	MAPKAPK5, PRAK; mitogen-activated protein kinase-activated protein kinase 5	EC:2.7.11.1	Protein kinases	ko01001	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.