Gene detail

Detailed information of scaffold3.g66.t2 in Aurelia aurita

Genomic Location: scaffold3:947569...977721
NR annotation: no NCBI-NR hit recorded
Species Aurelia aurita · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

scaffold3.g66.t2

cgaaaggcgtgaagtatcttttttctgaagagagtagacatttttttatggcctgtcaagagttcgttatttggatgctattaagaggtatgtccttgctactgatttagtttgttggatctagagcagtgcttcgccctgtcttctaaaataaagagcagagattatctaaaaaatgcttgaagtatcttttttctgaagaaagtaagcattgttgagggcctgtcaaaagttcattatttggttgctattaagagaattcatcttgataaggaggcaagtcgagtgaagtcattctacaacagctcaatagaacatttgaaacaaagacaacaattgagcaattgtgttacgaaataagagaacgattgtcagaaggaacaatactgtaacataagaaaagaatctcgaggaaacaatttgagcccttgatacaattggagagattggttttttggagaatttgattttgcggcctattgcaaagagaccacacataaagacgttgtgcttttatgttccttgatatggtttggtaatttcatattggttagaccaagactttttctcaagtattttattattggtggaattttaacaaagtcagacgctgtttctcaaagaccatgaagcacgaagtgcgtccttgaagaacggttttgcacttagaatggagctacgtattcgtaagaagccattctatggtattcttctcctgttatttcttgcactttatgcaagggaatgttcagctgccgcaaggaagaaattaacaattggcctatttgttccatggacgggccgctggccggccggaaagcgattggcgtccgctgcacccatagccatcgatgaaatcaataacaactcggctctcctacgggactatgagctgcaattcatttggtccgattgcggatgtagcaaagtaatgtccgccggtgggactgtcgaatttataaagaagaacatctcggctattattggtccgtattgtagcgacggttgcataccaagcggtctcattgccggttactaccatgttcctatgattacctacagctgttcatcttcggaactgtcgaagaaagcggaatacccgactactgcaagaacgtttgcctatgcccgaaccaatgaaatagtcctctttgataatactgtaaaaatggtgaagcatttcggctggaaatggttcacgataattaccgaattgtcgtccccgtggtctgaaattggaacgagattcatgagggatggatacaagcaagggctaaacgtaagggaaattcgctacaatcccgacgatgttgactacaataaggccgacgctgtgggaaataagaaggccgaagattatcgaaaaagtgtgttggattcagcaaaatcgagaggaagaattttcctgtttcttgggtattacagcaaagtacgacgcctgctttacacagcgaacaaaatggggctgttcaatgggttatatgtattcataaccgttgattttgtcgaagaatcaaagtgggacaaagaagggtggctcatggatgatggtggaacagtgagcaaaatttatgactcatttttggacttaagtgctgaaaaacctgatttaatcaagaagcacaagcatttcagtgaggaagttaggaagagattggcagattcgccatttaattacaccatggatgcttcagagaaggttgaaccttcatctgcttacttgtatgataccatatacatctatgcacgtgcatacaacaagactttgcagcaaggcaaagatcccacgaatactagtgtgcttatgcaaaatgtgtttggcagcacttttaatggttactctggctttgtccaacttgatagcaaaggtgatcgagtgccggtactgacactgcgaaactttattaatggagaaccgcagatcattcatacattcaaagacaactctaccttcagcccgacgttgaaagtcaaatggcctaatggagtcacaagtcctccaagggatgcccctccgtgtggatttgatgggtgcccgaagacatccaacagtgattacctactagcaggcattttgattggtgtgttgttgttgcttggtggttctttattctacatgtggtacaagagacgtaaattcgaaagagatttgctttgtgatggatttttcgtcaactatgatgaaattatcaatcattccgtttatcacgcaaagtcaggctcaatgtttgcttccaagcaaagcgacaaatcatataaaacagttacgaatgcaaatgaggaaacgaaaccgttcaacgagacatattctgtgccaagtgagacagaaagcatgctggagaaaagtcagtttgttgcaagatatcagggtcatcaagtggttatcaagagactcaataagacaacagttcaccgaaaccgtgaaatgcttcttgaatttaaaatggtccgagatcttagaagcgttaacatcaatccaattgttggtgtttgtgtacagtacccgaatatctgcatccttactcaatattgccagaaaagcagcctccaggatattttgcaaaatgaagacattaaattggatgcgatgttcaaattgtctcttgcgtcagacgtttgcatgggcatgctagagttacaccgcagtcctattggtgcacatggccgtttgtcttcaagcaattgcgtaattgacaacagatgggtgtgcaaaatcactgattatggtttagataaattcaaggcgaattctaaagaagatatatcggaataccaacagtatagaaaattgctttgggttgcaccggaattactggatcgatccgaccgcaaaacgaaacagggagatgtttacagttatggtatcatcctagctgaaattatgtcgcgggaagatccgtatgcggaaagacaaatggacccgaaagatatcgtacaagctataagtgaaaaccaagagccatccgtacgaccacgaattcctgattcagatactgatgtaagatatataaaactgatgcaagcttgctgggatgaaaatccgttgcaacgaccgacgtttgaagctattaaagcaaagattcgacaaatgcatggtggaagacaaggtaacctggtagacaatatggttggtatgcttgaaaaatatgcaaataatctggaagatttggtggaagagagaacacaacaacttgctgcagagaaacagaaaactgatgagttactttttaagatgttaccaaagtcgattgcagaagagctgaaacaaggacacaccgttactgctgagagcttcgactctgtcactatattcttcagtgatatcgttggttttactgctcttgcttcacaaagtactccaatgcaggtggttgatatgttgaatgatctttacacatgcttcgatcgtgttttggatgttcatgatgtgtacaaggttgaaacaatcggagatgcatacatggttgtatcaggcctaccgcaaaggaatggatacagacatgcaggagagattgccacaatgtcattagatttacttcactgcattaaatcgttcagaatcagacatattccagatgttaagctacaattgagagttggtatccacacaggctcatgcgttgctggagttgttggtctcaaaatgcctcggtattgtctctttggtgacactgtcaattatgcgtcgcgtatggaatcaagtggtctggctttgaggattcacgtcagcccagaatgtaaaacgctactagataaattatgtggatataaactagtggaaagaggtcctgttacgatgaagggtaaaggaacaattatcacgtacttcctcgatggcaaggagggctatgataaatcacttccagacctccgtttcgctgcctcgctggaggagcactctttcaagtgatgcatttctaatccttgcatgttactgactgccagagatcacgtgtctaatgatatataacctttgtggatgtatggtttgtcattcgattcaatttgaaacaactgcgtgatcaagttgcagacatgtgcgtgaagatgacgacagcaaatccgttgctgtggcgttttcgcgccaaaatcaatggtgccgggaacccagagcccaactgccaggtaccccaagccaagagcaccgggtcgtgtgacgaacatttgtgcgtagacctttggtatgagtagacgctagcagtattagaagttagccgacagtttcaactcgtaaattatcattttagggtcgggtgttatnatatatttacatttatcaccatttaaaagcatggagttagaattgaaccatccattgagaagattaatttcagattcaagctggggtattatattatcaattatgtttccttttatccatattgtattatcatcagcataattgcaaatttcagatttttctatgaataggaatatatcattaaggaaaatgttgaagagtaatggcccaagaactgagccttgagggacacccatggttatattcttccattcactgtgggttgaattaattttgactctttgggttctgttatgcaagtaactatataataattgtaatgcattatcactgaagccataagcatgtagtttagcaattaatagatcatgagggagacaatcaaaagcctttgataggtccatcattacagtaccagcaaccattttttcatctaggcatgcttttaagctttctgtgagtcgcaagagggcatgttgtaactctgataactctgataacttcctctagtataaataagttaaagtcttcctttccataagcttgactttttaacaacctttttcactaaaaaggaacaaacttcagcaaattaagcccccccccccccgcttccgacgggcctggatctagagcagtgcttcgccctgtcttctaaagtgaagagcagagattacccatgaaaggcttgaagtatcttttttctgaagaaagtaagcattttttgatagcctttcaaaagttgcaatgatttaagtcaatatttagaggtgtgactttgtttttaattctatttccttgcatctcaagcagtgcatagcccctgtcctctaaaagcaagagcagaaattgctttagaaatgcgagaatctcctttttcttatcaaagtaaacatcattttcctggtctgtgaaatgtttattgtgtgattggttgttagagataatacgttgctattggtttctatttttgatctcgagcagtgcatgagtcagtgtcttttaaaatgaagaacagagatttctctagaaaggcgtgaagcatctttttctgaagaaagtaaacactttttgatggcctgccagactttattgtatggttgatttcattgaagactttgaaggtataatgttgattgtgactttctttccttgtatctcgagcagtgcattgcccttgtctttcaaaataaaacgtggagattactctagaaaggcgcgaagcatctctttctaaagaaagtaaacactttttg

Transcript

scaffold3.g66.t2

CGAAAGGCGTGAAGTATCTTTTTTCTGAAGAGAGTAGACATTTTTTTATGGCCTGTCAAGAGTTCGTTATTTGGATGCTATTAAGAGGTATGTCCTTGCTACTGATTTAGTTTGTTGGATCTAGAGCAGTGCTTCGCCCTGTCTTCTAAAATAAAGAGCAGAGATTATCTAAAAAATGCTTGAAGTATCTTTTTTCTGAAGAAAGTAAGCATTGTTGAGGGCCTGTCAAAAGTTCATTATTTGGTTGCTATTAAGAGAATTCATCTTGATAAGGAGGCAAGTCGAGTGAAGTCATTCTACAACAGCTCAATAGAACATTTGAAACAAAGACAACAATTGAGCAATTGTGTTACGAAATAAGAGAACGATTGTCAGAAGGAACAATACTGTAACATAAGAAAAGAATCTCGAGGAAACAATTTGAGCCCTTGATACAATTGGAGAGATTGGTTTTTTGGAGAATTTGATTTTGCGGCCTATTGCAAAGAGACCACACATAAAGACGTTGTGCTTTTATGTTCCTTGATATGGTTTGGTAATTTCATATTGGTTAGACCAAGACTTTTTCTCAAGTATTTTATTATTGGTGGAATTTTAACAAAGTCAGACGCTGTTTCTCAAAGACCATGAAGCACGAAGTGCGTCCTTGAAGAACGGTTTTGCACTTAGAATGGAGCTACGTATTCGTAAGAAGCCATTCTATGGTATTCTTCTCCTGTTATTTCTTGCACTTTATGCAAGGGAATGTTCAGCTGCCGCAAGGAAGAAATTAACAATTGGCCTATTTgttccatggacgggccgctggccggccggaaagcgattggcgtccgctgcacccatagccatcgatgaaatcaataacaactcggctctcctacgggactatgagctgcaattcatttggtccgattgcgGATGTAGCAAAGTAATGTCCGCCGGTGGGACTGTCGAATTTATAAAGAAGAACATCTCGGCTATTATTGGTCCGTATTGTAGCGACGGTTGCATACCAAGCGGTCTCATTGCCGGTTACTACCATGTTCCTATGATTACCTACAGCTGTTCATCTTCGGAACTGTCGAAGAAAGCGGAATACCCGACTACTGCAAGAACGTTTGCCTATGCCCGAACCAATGAAATAGTCCTCTTTGATAATACTGTAAAAATGGTGAAGCATTTCGGCTGGAAATGGTTCACgataattaccgaattgtcgtccccgtggtctgaaattggaacgagattcatgagggatggatacaagcaagggctaaacgtaagggaaATTCGCTACAATCCCGACGATGTTGACTACAATAAGGCCGACGCTGTGGGAAATAAGAAGGCCGAAGATTATCGAAAAAGTGTGTTGGATTCAGCAAAATCGAGAGGAAGAATTTTCCTGTTTCTTGGGTATTACAGCAAAGTACGACGCCTGCTTTACACAGCGAACAAAATGGGGCTGTTCAATGGGTTATATGTATTCATAACCGTTGATTTTGTCGAAGAATCAAAGTGGGACAAAGAAGGGTGGCTCATGGATGATGGTGGAACAGTGAGCAAAATTTATGACTCATTTTTGGACTTAAGTGCTGAAAAACCTGATTTAATCAAGAAGCACAAGCATTTCAGTGAGGAAGTTAGGAAGAGATTGGCAGATTCGCCATTTAATTACACCATGGATGCTTCAGAGAAGgttgaaccTTCATCTGCTTACTTGTATGATACCATATACATCTATGCACGTGCATACAACAAGACTTTGCAGCAAGGCAAAGATCCCACGAATACTAGTGTGCTTATGCAAAATGTGTTTGGCAGCACTTTTAATGGTTACTCTGGCTTTGTCCAACTTGATAGCAAAGGTGATCGAGTGCCGGTACTGACACTGCGAAACTTTATTAATGGAGAACCGCAGATCATTCATACATTCAAAGACAACTCTACCTTCAGCCCGACGTTGAAAGTCAAATGGCCTAATGGAGTCACAAGTCCTCCAAGGGATGCCCCTCCGTGTGGATTTGATGGGTGCCCGAAGACATCCAACAGTGATTACCTACTAGCAGGCATTTTGATTGGTGTGTTGTTGTTGCTTGGTGGTTCTTTATTCTACATGTGGTACAAGAGACGTAAATTCGAAAGAGATTTGCTTTGTGATGGATTTTTCGTCAACTATGATGAAATTATCAATCATTCCGTTTATCACGCAAAGTCAGGCTCAATGTTTGCTTCCAAGCAAAGCGACAAATCATATAAAACAGTTACGAATGCAAATGAGGAAACGAAACCGTTCAACGAGACATATTCTGTGCCAAGTGAGACAGAAAGCATGCTGGAGAAAAGTCAGTTTGTTGCAAGATATCAGGGTCATCAAGTGGTTATCAAGAGACTCAATAAGACAACAGTTCACCGAAACCGTGAAATGCTTCTTGAATTTAAAATGGTCCGAGATCTTAGAAGCGTTAACATCAATCCAATTGTTGGTGTTTGTGTACAGTACCCGAATATCTGCATCCTTACTCAATATTGCCAGAAAAGCAGCCTCCAGGATATTTTGCAAAATGAAGACATTAAATTGGATGCGATGTTCAAATTGTCTCTTGCGTCAGACGTTTGCATGGGCATGCTAGAGTTACACCGCAGTCCTATTGGTGCACATGGCCGTTTGTCTTCAAGCAATTGCGTAATTGACAACAGATGGGTGTGCAAAATCACTGATTATGGTTTAGATAAATTCAAGGCGAATTCTAAAGAAGATATATCGGAATACCAACAGTATAGAAAATTGCTTTGGGTTGCACCGGAATTACTGGATCGATCCGACCGCAAAACGAAACAGGGAGATGTTTACAGTTATGGTATCATCCTAGCTGAAATTATGTCGCGGGAAGATCCGTATGCGGAAAGACAAATGGACCCGAAAGATATCGTACAAGCTATAAGTGAAAACCAAGAGCCATCCGTACGACCACGAATTCCTGATTCAGATACTGATGTAAGATATATAAAACTGATGCAAGCTTGCTGGGATGAAAATCCGTTGCAACGACCGACGTTTGAAGCTATTAAAGCAAAGATTCGACAAATGCATGGTGGAAGACAAGGTAACCTGGTAGACAATATGGTTGGTATGCTTGAAAAATATGCAAATAATCTGGAAGATTTGGTGGAAGAGAGAACACAACAACTTGCTGCAGAGAAACAGAAAACTGATGAGTTACTTTTTAAGATGTTACCAAAGTCGATTGCAGAAGAGCTGAAACAAGGACACACCGTTACTGCTGAGAGCTTCGACTCTGTCACTATATTCTTCAGTGATATCGTTGGTTTTACTGCTCTTGCTTCACAAAGTACTCCAATGCAGGTGGTTGATATGTTGAATGATCTTTACACATGCTTCGATCGTGTTTTGGATGTTCATGATGTGTACAAGGTTGAAACAATCGGAGATGCATACATGGTTGTATCAGGCCTACCGCAAAGGAATGGATACAGACATGCAGGAGAGATTGCCACAATGTCATTAGATTTACTTCACTGCATTAAATCGTTCAGAATCAGACATATTCCAGATGTTAAGCTACAATTGAGAGTTGGTATCCACACAGGCTCATGCGTTGCTGGAGTTGTTGGTCTCAAAATGCCTCGGTATTGTCTCTTTGGTGACACTGTCAATTATGCGTCGCGTATGGAATCAAGTGGTCTGGCTTTGAGGATTCACGTCAGCCCAGAATGTAAAACGCTACTAGATAAATTATGTGGATATAAACTAGTGGAAAGAGGTCCTGTTACGATGAAGGGTAAAGGAACAATTATCACGTACTTCCTCGATGGCAAGGAGGGCTATGATAAATCACTTCCAGACCTCCGTTTCGCTGCCTCGCTGGAGGAGCACTCTTTCAAGTGATGCATTTCTAATCCTTGCATGTTACTGACTGCCAGAGATCACGTGTCTAATGATATATAACCTTTGTGGATGTATGGTTTGTCATTCGATTCAATTTGAAACAACTGCGTGATCAAGTTGCAGACATGTGCGTGAAGATGACGACAGCAAATCCGTTGCTGTGGCGTTTTCGCGCCAAAATCAATGGTGCCGGGAACCCAGAGCCCAACTGCCAGGTACCCCAAGCCAAGAGCACCGGGTCGTGTGACGAACATTTGTGCGTAGACCTTTGGTATGAGTAGACGCTAGCAGTATTAGAAGTTAGCCGACAGTTTCAACTCGTAAATTATCATTTTAGGGTCGGGTGTTatnatatatttacatttatcaccatttaaaagcatggagttagaattgaaccatccattgagaagattaatttcagattcaagctggggtattatattatcaattatgtttccttttatccatattgtattatcatcagcataattgcaaatttcagatttttctatgaataggaatatatcattaaggaaaatgttgaagagtaatggcccaagaactgagccttgagggacacccatggttatattcttccattcactgtgggttgaattaattttgactctttgggttctgttatgcaagtaactatataataattgtaatgcattatcactgaagccataagcatgtagtttagcaattaatagatcatgagggagacaatcaaaagcctttgataggtccatcattacagtaccagcaaccattttttcatctaggcatgcttttaagctttctgtgagtcgcaagagggcatgttgtaactctgataactctgataacttcctctagtataaataagttaaagtcttcctttccataagcttgactttttaacaacctttttcactaaaaaggaacaaacttcagcaaattaagcccccccccccccgcttccgacgggcctgGATCTAGAGCAGTGCTTCGCCCTGTCTTCTAAAGTGAAGAGCAGAGATTACCCATGAAAGGCTTGAAGTATCTTTTTTCTGAAGAAAGTAAGCATTTTTTGATAGCCTTTCAAAAGTTGCAATGATTTAAGTCAATATTTAGAGGTGTGACTTTGTTTTTAATTCTATTTCCTTGCATCTCAAGCAGTGCATAGCCCCTGTCCTCTAAAAGCAAGAGCAGAAATTGCTTTAGAAATGCGAGAATCTCCTTTTTCTTATCAAAGTAAACATCATTTTCCTGGTCTGTGAAATGTTTATTGTGTGATTGGTTGTTAGAGATAATACGTTGCTATTGGTTTCTATTTTTGATCTCGAGCAGTGCATGAGTCAGTGTCTTTTAAAATGAAGAACAGAGATTTCTCTAGAAAGGCGTGAAGCATCTTTTTCTGAAGAAAGTAAACACTTTTTGATGGCCTGCCAGACTTTATTGTATGGTTGATTTCATTGAAGACTTTGAAGGTATAATGTTGATTGTGACTTTCTTTCCTTGTATCTCGAGCAGTGCATTGCCCTTGTCTTTCAAAATAAAACGTGGAGATTACTCTAGAAAGGCGCGAAGCATCTCTTTCTAAAGAAAGTAAACACTTTTTG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00211 all species →	Guanylate_cyc	Adenylate and Guanylate cyclase catalytic domain	Domain	Interproscan
PF01094 all species →	ANF_receptor	Receptor family ligand binding region	Family	Interproscan
PF07714 all species →	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan
PF07701 all species →	HNOBA	Heme NO binding associated	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001054 all species →	Domain	Adenylyl cyclase class-3/4/guanylyl cyclase	Interproscan
IPR050401 all species →	Family	Cyclic nucleotide synthase	Interproscan
IPR001170 all species →	Family	Adenylyl cyclase class-4/guanylyl cyclase	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR018297 all species →	Conserved_site	Adenylyl cyclase class-4/guanylyl cyclase, conserved site	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR028082 all species →	Homologous_superfamily	Periplasmic binding protein-like I	Interproscan
IPR029787 all species →	Homologous_superfamily	Nucleotide cyclase	Interproscan
IPR001828 all species →	Domain	Receptor, ligand binding region	Interproscan
IPR001245 all species →	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR011645 all species →	Domain	Haem NO binding associated	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11920 all species →	GUANYLYL CYCLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0009190 all species →	Biological Process	cyclic nucleotide biosynthetic process	Interproscan
GO:0035556 all species →	Biological Process	intracellular signal transduction	Interproscan
GO:0001653 all species →	Molecular Function	peptide receptor activity	Interproscan
GO:0004016 all species →	Molecular Function	adenylate cyclase activity	Interproscan
GO:0004383 all species →	Molecular Function	guanylate cyclase activity	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0006182 all species →	Biological Process	cGMP biosynthetic process	Interproscan
GO:0007168 all species →	Biological Process	receptor guanylyl cyclase signaling pathway	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0016849 all species →	Molecular Function	phosphorus-oxygen lyase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12323	ANPRA, NPR1; atrial natriuretic peptide receptor A	EC:4.6.1.2	Protein kinases	ko01001	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.