Detailed information of scaffold300.g22.t2 in Morbakka virulenta

Genomic Location: scaffold300:509951...578365
NR annotation: XP_047142683.1, protein strawberry notch homolog 1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A3KN83Protein strawberry notch homolog 1 OS=Homo sapiens OX=9606 GN=SBNO1 PE=1 SV=1
Q689Z5Protein strawberry notch homolog 1 OS=Mus musculus OX=10090 GN=Sbno1 PE=1 SV=2
Q5BJL5Protein strawberry notch homolog 1 OS=Rattus norvegicus OX=10116 GN=Sbno1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF13871Helicase_C_4C-terminal domain on Strawberry notch homologueDomainInterproscan
PF13872AAA_34P-loop containing NTP hydrolase pore-1DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR026741FamilyProtein strawberry notchInterproscan
IPR026937DomainStrawberry notch, helicase C domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR039187DomainStrawberry notch, AAA domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12706STRAWBERRY NOTCH-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0031490Molecular Functionchromatin DNA bindingInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K26273SBNO, SNO, FGT1; protein strawberry notch-Chromosome and associated proteinsko03036deepkoala

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