Detailed information of scaffold303.g5.t6 in Aurelia aurita complex sp. Pacific

Genomic Location: scaffold303:143706...262214
NR annotation: no NCBI-NR hit recorded
Species Aurelia aurita complex sp. Pacific · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12780
all species →
AAA_8P-loop containing dynein motor region D4DomainInterproscan
PF17852
all species →
Dynein_AAA_lidDynein heavy chain AAA lid domainDomainInterproscan
PF00078
all species →
RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF12775
all species →
AAA_7P-loop containing dynein motor regionDomainInterproscan
PF12781
all species →
AAA_9ATP-binding dynein motor regionDomainInterproscan
PF17857
all species →
AAA_lid_1AAA+ lid domainDomainInterproscan
PF08393
all species →
DHC_N2Dynein heavy chain, N-terminal region 2FamilyInterproscan
PF12774
all species →
AAA_6Hydrolytic ATP binding site of dynein motor regionDomainInterproscan
PF12777
all species →
MTMicrotubule-binding stalk of dynein motorDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR024317
all species →
DomainDynein heavy chain, AAA module D4Interproscan
IPR000477
all species →
DomainReverse transcriptase domainInterproscan
IPR041466
all species →
DomainDynein heavy chain, AAA 5 extension domainInterproscan
IPR042228
all species →
Homologous_superfamilyDynein heavy chain, linker, subdomain 3Interproscan
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR035706
all species →
DomainDynein heavy chain, ATP-binding dynein motor regionInterproscan
IPR041589
all species →
DomainDynein heavy chain 3, AAA+ lid domainInterproscan
IPR026983
all species →
FamilyDynein heavy chainInterproscan
IPR043502
all species →
Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR003593
all species →
DomainAAA+ ATPase domainInterproscan
IPR043157
all species →
Homologous_superfamilyDynein heavy chain, AAA1 domain, small subdomainInterproscan
IPR013602
all species →
DomainDynein heavy chain, linkerInterproscan
IPR042222
all species →
Homologous_superfamilyDynein heavy chain, domain 2, N-terminalInterproscan
IPR035699
all species →
DomainDynein heavy chain, hydrolytic ATP-binding dynein motor regionInterproscan
IPR024743
all species →
DomainDynein heavy chain, coiled coil stalkInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45703
all species →
DYNEIN HEAVY CHAINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0007018
all species →
Biological Processmicrotubule-based movementInterproscan
GO:0030286
all species →
Cellular Componentdynein complexInterproscan
GO:0045505
all species →
Molecular Functiondynein intermediate chain bindingInterproscan
GO:0051959
all species →
Molecular Functiondynein light intermediate chain bindingInterproscan
GO:0016887
all species →
Molecular FunctionATP hydrolysis activityInterproscan
GO:0005524
all species →
Molecular FunctionATP bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K10408DNAH; dynein axonemal heavy chain-Cytoskeleton proteinsko04812deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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