Gene detail

Detailed information of scaffold319.g17.t2 in Morbakka virulenta

Genomic Location: scaffold319:834849...877918
NR annotation: XP_047143586.1, protein tweety homolog 2 isoform X3 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

scaffold319.g17.t2

GAAAATATCCAATCAGAGGCAGTTGTCGTGCCCACAACTTATTGAAAGCGGTTCCAAAGTTTAGCTAGAATTTCGTGCACCAGAGACAAGTATGGCGGCCAAGTCGAAATGGCTTGCAGAAATGTTTCACTCCTTTCCACATTTGGATTTTGATTTTGAGTGGACGACTACCGTCTTTACACCAGATGATCAGGGATATAGACAAGCCTTGATGTTCAATGGTATTATCCTGCTTTTTGTTGCAATAGTTCTTTTTCTTGGCTTGACATTGTACTTTTTGGTGTGTTCCTGTTATTTTTGTTCAAGATGCCATCCACCATTAAAACCAAAGCCTCACAAAAGTCGATACCTACGATTACTGACAGCGGTGCTGGCCTTTTTTTCTTGCGTGGGACTTGGTGTTGGATTCTATGGCAATAACAAAGCAAGCTCTGGTGTGAACAAATTTACTGATGCTGCAATTAGCATTTATGATACTTGGGATATGTTCAAAATTAAAAATACCGTTGCGAAACAGTATCTTGAGGAAGGGGCCAACAACACTGTTTATGAACTGATAGGTGCTTTGAAAAGAGAAGGAATATTTGTACCAAAAATTTTACGTAATCTGTCAGATATTGCGGATGTTGTACTTAATGACCTGAATATTTCAAGCAAAAAATTGTCGGATAGTACAGTCGACTTTAAAGGCCTAGCAGATGATATATTACAGTATGACAATTTAAGGTGGTGGATTACGGTTGCCATTCACTTTTGGCACCTTCTGGTTGTTATGGTAGTGATCTACGCAGCCTGGCGCGAAAGAAAGTGTCCTTTCGTTTTGTTGGCAGTCATGGCCGTTTTGTGTCTTTTTTGCATGACTGGAAGCATAAGCGTCGAAGTGCCCTTCAGTATAGCTGCAGCAGATGTTTGTATTGCACCAAAAGAGACAGTGTATAAAAATGTACAAGGCACTGCTGAAAAAGCAATCATCTCCTATTACCTAAACTGCAAGAGTGGAAGTGAAAACCCTCTTTTAGAGCCTTATCATTATGCCAGAAACAGACTTGAACAAGTGGATCAGATGTTAAAAGAAGTAGCGAAAAATCCCTTTGTTTTGATGTTAAATAACACACAGTTTTACTTAAAGAAAATGGTCAGCTTTTTTGGAAATAGCAAGGCAGAAATCGACCAGCTTATAAAAGCACTCGACTGTGCATTGGTTCACAAGAGCTTTAATGAAGGAGTCAATGAAGTTTGCTTTACCAGCTTTAATGAAGGAGTCAATGAAGTTTGCTTTACCGTCTTGGAGGGTCTGTCATTACTTATTTTGGCTGCACTCATACTTTCTGTCTTCCTTGTATGCATTATTGTATGCATTACACCTATTTGGAAGTCAATGGCAAGGCTCAGGTCGATATTGAGGAAGCCAGGAGGAGGAGTTAGGCTTGTTACTAGTAGCTACAGTGGCCCACCAGGCGACGGGGGTCTACTAAATTCTTCTTGGGATACTTCGCTTGATGCGTCCTACAAATCAATTAATGAAGAGCAAGAAAATCGCACTGATGAAAGCGTGCCGTTGGTTTCTCGAGATGACCCACCTGCGTATGCAGCTGTTCATGGGTCAACAGAATTCTTGTCTGTTGAAGAAGATAGAAGAAAGCACTTGCAGGCAGAATCAGAGGCATAAAAAATATTTACTTGAGAGAATTTAAAAGAACACAAATCGAAGTGGGCTAGTTAGATTTTTTGAAGTTAAAGGGGGATAGTCATTTTCTTACGTTGCATATACAATATTAAGTATTAAATTGGTATTTAATACCGTTTTGGAAATATCCTTTTGCATTATTTGGTATGTTAGAATTTTGCTCGGTTTTGGGCATGTTTATTACATAAAGAATATCATTTTGAAACTCAGTTTGGTTTAACATACTGTGACCTTGTTATATATCCAAACATAAACTACACGCGATGTCAGAATATCACTGTAATTTCTATTAGCGTGTGTACCAGCTTGTGATTTCAATAGTGTGGCAATCACCAGCTTTTGGTGATTGCCATTTGACTAAAGATAGTTGAGAGAAAAACAAAAATTTAGACATATCCAGTCATATATCTGTTCCCAGAACAGAATCACTCACAATGTCAACTTTCCGTTAAACGCCACAACAACGCTGGACCCTATTTCTAGTATCTCATGGAATTTTTTGACAATTTTGCATTTAGTTATTTTTTTACGTGTAGCTTGTTTCATGTGTGCAGATGAAAAGTAATGATAGAAGGATCAGTTAATATTAAGTAAAGGTGGCCAACTTTTTTATACTACTAACAGGACTGAAAAAATGATATGATGGGCA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04906	Tweety	Tweety	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006990	Family	Tweety	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12424	TWEETY-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005229	Molecular Function	intracellularly calcium-gated chloride channel activity	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0072320	Molecular Function	volume-sensitive chloride channel activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K22641	TTYH; protein tweety	-	Transporters	ko02000	deepkoala