Gene detail

Detailed information of scaffold331.g11.t1 in Aurelia aurita complex sp. Pacific

Genomic Location: scaffold331:191919...201224
NR annotation: no NCBI-NR hit recorded
Species abbreviation AAURI2 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

scaffold331.g11.t1

aaatttcttccttttttgcaggttaattcaaaagacaacacaatatgcagtttacgacccttttgtcacaccaccaaccccatcaaatccgtggatttctgaggatacttcattttggcaagataataccaaaaagtatacttctggttggataaattggattgaaatggataataaaaataaaactgggagtttcatttctggcagctcggatagcttaccgcagagcactgaacggatcgtccctcctcaaaagcaagtcagacgttggggattctctttaaatgatctacttcgggattcgcaaggaacagttttgtttttgaaatatctggaaaaagaattcagcgctgagaatttgagattctggctgacagttgaagaattcaagttctgtcctctctcgataattagtggtaatgccaagcaaattcataaggaatatatcggtaaagatgcaatgtactcaataaatgtggattcgagagctgttgaacttgtcaatgaaagaatgaaagatccaaaccacttcacttttgatcctgcccaggagcaaatttacacgctgatgcgaacagatagttacaaacgtttcttaaaatcagatcaatatgaatctttactacgggatacgccgcagtcaagacgggggattgtggatgcaatcaaaggctggcgaggtcccaaaacgtagacagcctagcaattttaagcgaactgttcatgcaaaatattatttttctctacccgtagcgttaattcagttgtatacttagaattataattacaaacatgttcacatgcgggtcgcttggtaaagttcctcgctgtgttagattggttgaacagtggcttaggtagataaattttgaataagcccatttcaaagtcattcttttatttgttttaagacgttgaaaccgcgtagaaaattagcaacgaatactgagttagtcgcaaatactctcgtcaacaaatagcacataacaaaattctctatcgataaaagtaaaaccacaaaatgtagagaacaattttaggtttctatgatgacgtgtagttgttgaagcaccaatcagagtgtcgcaatttatcaagtttcatagagacagaggattattacagatccatgtgtaagaaaggcattgcgtagccttttgtttgggcctaacgaaagctttgagaacagttttcctattgccctcacccttacgacacctaaatgctaacagaaatacccaaacttggcctctaaattcaagttatattttatcttcagagtaggcatattggattaatttgtacgatttctactcactcggcagttctagtttagtcgttgaaatttataagcttttctagtaggttttagcttcatgaaggttttacttagatttagcatggtacatgctttcagagaggatttgcatgaaaacttgcttcgtctgacattttctaacaaattgattaatgaggtaagatcccaaacagaacctaaaaactatatggatgttgtggaaaataatgtatactaaccgggtgactaaaaaaatgtcccgttgatcaaatcttccaacttgtttgaaatcttttcgaaatccttttgagaattagcatgactaaaaaatgatgagctgaaagtgaggacctcaaaactagcggggattttataaatgctgtagttctgaaataatgatgatatcaaaaatgcactctctgtgttatggtaagttacatgaaattcactttaatcaattcagttgaaagaatggagcaataacattttacacgaattttaaattttggcctaagttaggttttaaattttgcaaagatccaagccgtatgcttaataagctaccgggtgtccccaaaaatgtatacggatttggttgactccagcgctgtgaatttagcttcaatcacaatctaatcactctaaaaatgtttctcgatagttaacttgaacatagatacctcgtttgttgatattggtactttgagagcagacatgttaagcttgaaagctcaaatttgcctcgtcctgcaagccagaactttagccttttggcctaagcaatttcttaaggcactgcgtataaatcaacgatagccttgata

Transcript

scaffold331.g11.t1

AAATTTCTTCCTTTTTTGCAGGTTAATTCAAAAGACAACACAATATGCAGTTTACGACCCTTTTGTCACACCACCAACCCCATCAAATCCGTGGATTTCTGAGGATACTTCATTTTGGCAAGATAATACCAAAAAGTATACTTCTGGTTGGATAAATTGGATTGAAATGGATAATAAAAATAAAACTGGGAGTTTCATTTCTGGCAGCTCGGATAGCTTACCGCAGAGCACTGAACGGATCGTCCCTCCTCAAAAGCAAGTCAGACGTTGGGGATTCTCTTTAAATGATCTACTTCGGGATTCGCAAGGAACAGTTTTGTTTTTGAAATATCTGGAAAAAGAATTCAGCGCTGAGAATTTGAGATTCTGGCTGACAGTTGAAGAATTCAAGTTCTGTCCTCTCTCGATAATTAGTGGTAATGCCAAGCAAATTCATAAGGAATATATCGGTAAAGATGCAATGTACTCAATAAATGTGGATTCGAGAGCTGTTGAACTTGTCAATGAAAGAATGAAAGATCCAAACCACTTCACTTTTGATCCTGCCCAGGAGCAAATTTACACGCTGATGCGAACAGATAGTTACAAACGTTTCTTAAAATCAGATCAATATGAATCTTTACTACGGGATACGCCGCAGTCAAGACGGGGGATTGTGGATGCAATCAAAGGCTGGCGAGGTCCCAAAACGTAGACAGCCTAGCAATTTTAAGCGAACTGTTCATGCAAAATATTATTTTTCTCTACCCGTAGCGTTAATTCAGTTGTATACTTAGAATTATAATTACAAACATGTTCACATGCGGGTCGCTTGGTAAAGTTCCTCGCTGTGTTAGATTGGTTGAACAGTGGCTTAGGTAGATAAATTTTGAATAAGCCCATTTCAAAGTCATTCTTTTATTTGTTTTAAGACGTTGAAACCGCGTAGAAAATTAGCAACGAATACTGAGTTAGTCGCAAATACTCTCGTCAACAAATAGCACATAACAAAATTCTCTATCGATAAAAGTAAAACCACAAAATGTAGAGAACAATTTTAGGTTTCTATGATGACGTGTAGTTGTTGAAGCACCAATCAGAGTGTCGCAATTTATCAAGTTTCATAGAGACAGAGGATTATTACAGATCCATGTGTAAGAAAGGCATTGCGTAGCCTTTTGTTTGGGCCTAACGAAAGCTTTGAGAACAGTTTTCCTATTGCCCTCACCCTTACGACACCTAAATGCTAACAGAAATACCCAAACTTGGCCTCTAAATTCAAGTTATATTTTATCTTCAGAGTAGGCATATTGGATTAATTTGTACGATTTCTACTCACTCGGCAGTTCTAGTTTAGTCGTTGAAATTTATAAGCTTTTCTAGTAGGTTTTAGCTTCATGAAGGTTTTACTTAGATTTAGCATGGTACATGCTTTCAGAGAGGATTTGCATGAAAACTTGCTTCGTCTGACATTTTCTAACAAATTGATTAATGAGGTAAGATCCCAAACAGAACCTAAAAACTATATGGATGTTGTGGAAAATAATGTATACTAACCGGGTGACTAAAAAAATGTCCCGTTGATCAAATCTTCCAACTTGTTTGAAATCTTTTCGAAATCCTTTTGAGAATTAGCATGACTAAAAAATGATGAGCTGAAAGTGAGGacctcaaaactagcggggattttataaatgctgtagttctgaaataatgatgatatcaaaaatgcactctctgtgttatggtaagttacatgaaattcactttaatcaattcagttgaaAGAATGGAGCAATAACATTTTACACGAATTTTAAATTTTGGCCTAAGTTAGGTTTTAAATTTTGCAAAGATCCAAGCCGTATGCTTAATAAGCtaccgggtgtccccaaaaatgtatacggatttggttgactccagcgctgtgaatttagcttcaatcacaatctaatcactctaaaaatgtttctcgatagttaacttgaacatagatacctcgtttgttgatattggtactttgagagcagacatgttaagcttgaaagctcaaatttgcctcgtcctgcaagccagaactttagccttttggcctaagcaatttcttaaggcactgcgtataaatcaacgatagccttgata

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00615 all species →	RGS	Regulator of G protein signaling domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016137 all species →	Domain	RGS domain	Interproscan
IPR036305 all species →	Homologous_superfamily	RGS domain superfamily	Interproscan
IPR047016 all species →	Family	Regulator of G protein signaling 6/7/9/11	Interproscan
IPR044926 all species →	Homologous_superfamily	RGS, subdomain 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45746 all species →	LP21163P	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005096 all species →	Molecular Function	GTPase activator activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0008277 all species →	Biological Process	regulation of G protein-coupled receptor signaling pathway	Interproscan
GO:0043547 all species →	Biological Process	positive regulation of GTPase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16449	RGS; regulator of G-protein signaling	-	Signaling proteins	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.