Gene detail

Detailed information of scaffold347.g16.t2 in Aurelia aurita complex sp. Pacific

Genomic Location: scaffold347:211340...223624
NR annotation: no NCBI-NR hit recorded
Species Aurelia aurita complex sp. Pacific · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

scaffold347.g16.t2

gattgcattttctgagatctccagtgaagaaacgctgtctttagcttcattcaggatttgaattggttcttgactccttgatcttatgtcccaacatcttattgatgcatcatacgatccagagattagcactgtgaaatcaggctggtttgctctcatgcagttaaccctctaatagaaacagatatgaaatgtgtaaatatataaagatgatatgatacagcacaccagtttgtgtaaatttgtcagaaataagcacttgttttatttatgatccagttgaacagattttattatgacaaacattggacacaaattaatctcaagcatccaatatggcattctaaggtaatattttctcttctcttttatcatctcccataaaataattacaagaaaaaatgccatttcattacatacaaaagaatacagtaaaatgaagctcattaatataataagcagctatgtttgttgtggttagaaagaggcagcttacgctaagatgaccgcgaaatttcctaacactctttccagttgcaacatcccataaaacaaccatcttatcagctccacatgatgctaatttgtcattttcactcgaagcaactgcatctaaaacttcgtatccatggcccatgtatgtttttaataatgtccctttgtgaggattccataatcgcaaagttttgtcacttccacatgtcaaacaataatttccatctgtgttgaatcgtacggctctaacggggccttcgtgaccaccatttaagttttgtatttcgtttaggcccttcacagcttcttcctcgctgttgtccgccattactatattttcttggaaaagcattgaacctcgttttgaagtttaaaatcgttgttaggagaaacgggaagtgcggaggagaagggcagaaatagaggaaaacttttcgaaagcagtcattttagaaagaaacgaattttagaacgcaatcttagtcatgggttccttgtggttactcttcttgcttcagagacaagtgttcggggagccaaactaaaacgaatgtagtaaatcttaaatcatgttccgatttgcaaacaccagcaaaggaaaagagtaaaagagaagatatgtgggtatttttctacccccattgataagaatctccgtacatttttgcatccatgctaggggtgctatgccctgggtaccagagcctaaaatttagaaagaaaaagtaacaaagtaaaagagtaaaagatttcctaaattctaaatatctagggtctggtacccagggtagggctgctttacttcaataatcaaatgctattatctgggctgcaaaaaactatccccaatacgtttttgtgacgcaaaaccatccaacactgtgtctcatgggccttgtatgaagactgtttttacattgctatggtttttgggcataaacaaacaacaaattggcaagaaagcaataaatccatgcaaacttatcgctgaaattgttctcacttgtttgtaaactaagccccaaaggtcccattattttcttatccaatttcctgcgagacgcaaaaactcttcggacattcaatgacgcaacgaaatccgatttggttctcaggcactgcacgatgatacaggaaaatatgaaaagttattgagaagtcatatttacagttttggatattttcaatggaaaatgaaaagaccaaactgtaaatggcgaaagaaaacgatccgaagacgtcttccaaattatctgctgctgatggctctcattcttctaatcaagattattgcgaaggagatgaaggatggttcgcttcgtttgttcgacgttttttatcaaagttttcaaaaagaagcagctctggtgtcgataataacgatgattcgagaataaaacagatacctggaaaacatcgaatagatatttttgatctctactcgtttaaaaagaatgggatgtcatttttcagtgacaaaatactgaaatataatagcagggtgttcaagtctatgcttggaagcctcagccttaatacaatcatctgtgatgtcgatgctatctgtgaaagttgctgtgatgcatcaaaggtatttaaagagccagtatttggcagaaagatggtgaatttatcgatcattggcaatcatctaccctgcatgtttacaaatgactttcttcatgcaaagagaaaagcctttcatatgggtctttctgatcgtgtcgccacgttctacttgctaccagcacttgtcgaacttattccaaatcacatgaagggatggaatggctcaggcgggatattttgttcagatcgtagcaagacttctatctcatttgaagacaaaatcttaaaactggtggcagcgatttattcaaaagcttttcttggagttgttattgattatgaatgtatgaagatttggcacaaaagcattttcaatacttcaaggttcaatgctattccaaacaccgtgagtgccatgacgtcagcaattggtcgctgcgcaagtcaagacatggaaacgagacgagtttttagaaatgaggcagcgattttcatgcataatggagttcaaatgagttccctggcaagactaaataatcttgaaaactttattcttgaggtaattcgcttgagccctcctgtaccatttgtcttcggaactgcaagatcaaaatttgtgctctgttcatcttctggtaacttcacaattaatgaaggacacatgctggcaggaaatttatacgaagcacaccgtgatccagaatggttttcagaccccaagcagtttcacccatctagattcaccgatgactgcatgttgaaggattgtattttgtcatttggtggaagatatacagatgatgccaaatctggaaatcgaaaatgtcccggtcagaatgtggccatgacaatcctcaagacatgcttatcattttttctacaatgtgatttcagtttggaaactccagccattttcaaggataaaaatcttggaagatctggcttgccagatgagccattattgttggaaaccttcaaatttcatcaaccatcttggtggagattctctgagcaaggtcatgatgtcatcaacatttgcacaagagatatgttaaacagccgtcttagtttttgcactgaaggatcgatgacacggaattcttcaatcacaatctactatggtggaacatcatctttcgaaggcgacgaaagtagctgtgttcaacatatttttcctcaaaatcttctccatcctggttaccagggaagcaggcgttcgcatcatcattcggaaggaacaaacacgaattctagtctcagtatggttgatgtagacatgatgtaaaatatgataaactactgtaaggtgtttttagatttatgaatgttatttgtttcgtatttgggacaccgtttctttattattttaaaacactgtcctttaaggtctttgctttagttcagcaaccaacaattttcccttcaagaaggcttgttaagagataccctgggtaccagtgccagcaaaaataaaaaaatggtacacaaatttctttccctacaagacatttcattcttgttaatgattgatgtttgctgtggtacctaatgggaaggatgggagggactttcagatatgttgatctcagctagcaaatagcttctaaagctaaaacaaaaactgaaaagcttttctttcagtgatacctctgggggggggggaccattatgaaaacaaagtcagactgaccttttgatgctattcctgccatccgggggtgtttttacattagattttaacttttatatctatatattgtacacatgtaattagacatctctttttctttctaatatcttcccgatccgtttttcattaatgttattttgcttgcagaagcaactgttgtttgtgtagttgaaacagttcgatctgatgatacttcctaagaataatatcttattgatctgctctaacttcattgttcgaataatacagtcacgtgagtctcccaaaaggtcctttgattataggaaatgtgggccttaccttttcggtagagtttttttattttggataaaattgttatagcaagagtttcttgcagagcttctttatttccgtgatctaaatttctataattcttgatatatacattctttaaattcacacacatttgctgttgttccttcgtcgtgttgtgtgtttctgcctaccaacgtattcatttattatgaccgcaagcatctttggatctggtgatcgacgatggtagactggccttttattttttcgaattattttctaattatgcgaacgaataactagacgaagcgttt

Transcript

scaffold347.g16.t2

GATTGCATTTTCTGAGATCTCCAGTGAAGAAACGCTGTCTTTAGCTTCATTCAGGATTTGAATTGGTTCTTGACTCCTTGATCTTATGTCCCAACATCTTATTGATGCATCATACGATCCAGAGATTAGCACTGTGAAATCAGGCTGGTTTGCTCTCATGCAGTTAACCCTCTAATAGAAACAGATATGAAATGTGTAAATATATAAAGATGATATGATACAGCACACCAGTTTGTGTAAATTTGTCAGAAATAAGCACTTGTTTTATTTATGATCCAGTTGAACAGATTTTATTATGACAAACATTGGACACAAATTAATCTCAAGCATCCAATATGGCATTCTAAGGTAATATTTTCTCTTCTCTTTTATCATCTCCCATAAAATAATTACAAGAAAAAATGCCATTTCATTACATACAAAAGAATACAGTAAAATGAAGCTCATTAATATAATAAGCAGCTATGTTTGTTGTGGTTAGAAAGAGGCAGCTTACGCTAAGATGACCGCGAAATTTCCTAACACTCTTTCCAGTTGCAACATCCCATAAAACAACCATCTTATCAGCTCCACATGATGCTAATTTGTCATTTTCACTCGAAGCAACTGCATCTAAAACTTCGTATCCATGGCCCATGTATGTTTTTAATAATGTCCCTTTGTGAGGATTCCATAATCGCAAAGTTTTGTCACTTCCACATGTCAAACAATAATTTCCATCTGTGTTGAATCGTACGGCTCTAACGGGGCCTTCGTGACCACCATTTAAGTTTTGTATTTCGTTTAGGCCCTTCACAGCTTCTTCCTCGCTGTTGTCCGCCATTACTATATTTTCTTGGAAAAGCATTGAACCTCGTTTTGAAGTTTAAAATCGTTGTTAGGAGAAACGGGAAGTGCGGAGGAGAAGGGCAGAAATAGAGGAAAACTTTTCGAAAGCAGTCATTTTAGAAAGAAACGAATTTTAGAACGCAATCTTAGTCATGGGTTCCTTGTGGTTACTCTTCTTGCTTCAGAGACAAGTGTTCGGGGAGCCAAACTAAAACGAATGTAGTAAATCTTAAATCATGTTCCGATTTGCAAACACCAGCAAAGGAAAAGAGTAAAAGAGAAGATATGTGGGTATTTTTCTACCCCCATTGATAAGAATCTCCGTACATTTTTGCATCCATGCTAGGGGTGCTATGCCCTGGGTACCAGAGCCTAAAATTTAGAAAGAAAAAGTAACAAAGTAAAAGAGTAAAAGATTTCCTAAATTCTAAATATCTAGGGTCTGGTACCCAGGGTAGGGCTGCTTTACTTCAATAATCAAATGCTATTATCTGGGCTGCAAAAAACTATCCCCAATACGTTTTTGTGACGCAAAACCATCCAACACTGTGTCTCATGGGCCTTGTATGAAGACTGTTTTTACATTGCTATGGTTTTTGGGCATAAACAAACAACAAATTGGCAAGAAAGCAATAAATCCATGCAAACTTATCGCTGAAATTGTTCTCACTTGTTTGTAAACTAAGCCCCAAAGGTCCCATTATTTTCTTATCCAATTTCCTGCGAGACGCAAAAACTCTTCGGACATTCAATGACGCAACGAAATCCGATTTGGTTCTCAGGCACTGCACGATGATACAGGAAAATATGAAAAGTTATTGAGAAGTCATATTTACAGTTTTGGATATTTTCAATGGAAAATGAAAAGACCAAACTGTAAATGGCGAAAGAAAACGATCCGAAGACGTCTTCCAAATTATCTGCTGCTGATGGCTCTCATTCTTCTAATCAAGATTATTGCGAAGGAGATGAAGGATGGTTCGCTTCGTTTGTTCGACGTTTTTTATCAAAGTTTTCAAAAAGAAGCAGCTCTGGTGTCGATAATAACGATGATTCGAGAATAAAACAGATACCTGGAAAACATCGAATAGATATTTTTGATCTCTACTCGTTTAAAAAGAATGGGATGTCATTTTTCAGTGACAAAATACTGAAATATAATAGCAGGGTGTTCAAGTCTATGCTTGGAAGCCTCAGCCTTAATACAATCATCTGTGATGTCGATGCTATCTGTGAAAGTTGCTGTGATGCATCAAAGGTATTTAAAGAGCCAGTATTTGGCAGAAAGATGGTGAATTTATCGATCATTGGCAATCATCTACCCTGCATGTTTACAAATGACTTTCTTCATGCAAAGAGAAAAGCCTTTCATATGGGTCTTTCTGATCGTGTCGCCACGTTCTACTTGCTACCAGCACTTGTCGAACTTATTCCAAATCACATGAAGGGATGGAATGGCTCAGGCGGGATATTTTGTTCAGATCGTAGCAAGACTTCTATCTCATTTGAAGACAAAATCTTAAAACTGGTGGCAGCGATTTATTCAAAAGCTTTTCTTGGAGTTGTTATTGATTATGAATGTATGAAGATTTGGCACAAAAGCATTTTCAATACTTCAAGGTTCAATGCTATTCCAAACACCGTGAGTGCCATGACGTCAGCAATTGGTCGCTGCGCAAGTCAAGACATGGAAACGAGACGAGTTTTTAGAAATGAGGCAGCGATTTTCATGCATAATGGAGTTCAAATGAGTTCCCTGGCAAGACTAAATAATCTTGAAAACTTTATTCTTGAGGTAATTCGCTTGAGCCCTCCTGTACCATTTGTCTTCGGAACTGCAAGATCAAAATTTGTGCTCTGTTCATCTTCTGGTAACTTCACAATTAATGAAGGACACATGCTGGCAGGAAATTTATACGAAGCACACCGTGATCCAGAATGGTTTTCAGACCCCAAGCAGTTTCACCCATCTAGATTCACCGATGACTGCATGTTGAAGGATTGTATTTTGTCATTTGGTGGAAGATATACAGATGATGCCAAATCTGGAAATCGAAAATGTCCCGGTCAGAATGTGGCCATGACAATCCTCAAGACATGCTTATCATTTTTTCTACAATGTGATTTCAGTTTGGAAACTCCAGCCATTTTCAAGGATAAAAATCTTGGAAGATCTGGCTTGCCAGATGAGCCATTATTGTTGGAAACCTTCAAATTTCATCAACCATCTTGGTGGAGATTCTCTGAGCAAGGTCATGATGTCATCAACATTTGCACAAGAGATATGTTAAACAGCCGTCTTAGTTTTTGCACTGAAGGATCGATGACACGGAATTCTTCAATCACAATCTACTATGGTGGAACATCATCTTTCGAAGGCGACGAAAGTAGCTGTGTTCAACATATTTTTCCTCAAAATCTTCTCCATCCTGGTTACCAGGGAAGCAGGCGTTCGCATCATCATTCGGAAGGAACAAACACGAATTCTAGTCTCAGTATGGTTGATGTAGACATGATGTAAAATATGATAAACTACTGTAAGGTGTTTTTAGATTTATGAATGTTATTTGTTTCGTATTTGGGACACCGTTTCTTTATTATTTTAAAACACTGTCCTTTAAGGTCTTTGCTTTAGTTCAGCAACCAACAATTTTCCCTTCAAGAAGGCTTGTTAAGAGATACCCTGGGTACCAGTGCCAGCAAAAATAAAAAAATGGTACACAAATTTCTTTCCCTACAAGACATTTCATTCTTGTTAATGATTGATGTTTGCTGTGGTACCTAATGGGAAGGATGGGAGGGACTTTCAGATATGTTGATCTCAGCTAGCAAATAGCTTCTAAAGCTAAAacaaaaactgaaaagcttttctttcagtgatacctctgggggggggggaccattatgaaaacaaagtcagactgaccttttgatgctattcctgccatccgggggtgtttttacattagattttaacttttatatctatatattgtacacatgtaattagacatctctttttCTTTCTAATATCTTCCCGATCCGTTTTTCATTAATGTTATTTTGCTTGCAGAAGCAACTGTTGTTTGTGTAGTTGAAACAGTTCGATCTGATGATACTTCCTAAGAATAATATCTTATTGATCTGCTCTAACTTCATTGTTCGAATAATACAGTCACGTGAGTCTCCCAAAAGGTCCTTTGATTATAGGAAATGTGGGCCTTACCTTTTCGGTAGAGTTTTTTTATTTTGGATAAAATTGTTATAGCAAGAGTTTCTTGCAGAGCTTCTTTATTTCCGTGATCTAAATTTCTATAATTCTTGatatatacattctttaaattcacacacatttgctgttgttccttcgtcgtgttgtgtgtttctgcctaccaacgtattcatttattatgaccgcaagcatctttggatctggtgatcgacgatggtagactggccttttattttttcgaattattttCTAATTATGCGAACGAATAACTAGACGAAGCGTTT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00067 all species →	p450	Cytochrome P450	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001128 all species →	Family	Cytochrome P450	Interproscan
IPR002403 all species →	Family	Cytochrome P450, E-class, group IV	Interproscan
IPR036396 all species →	Homologous_superfamily	Cytochrome P450 superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24286 all species →	CYTOCHROME P450 26	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016125 all species →	Biological Process	sterol metabolic process	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan
GO:0004497 all species →	Molecular Function	monooxygenase activity	Interproscan
GO:0005506 all species →	Molecular Function	iron ion binding	Interproscan
GO:0016705 all species →	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Interproscan
GO:0020037 all species →	Molecular Function	heme binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for scaffold347.g16.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.