Genomic Location: scaffold357:30909...268215
NR annotation: NXG59099.1, COFA1 protein [Hemiprocne comata]
| CDS |
| scaffold357.g1.t3 |
| Transcript |
| scaffold357.g1.t3 |
| Protein |
| scaffold357.g1.t3 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01391 | Collagen | Collagen triple helix repeat (20 copies) | Repeat | Interproscan |
| PF20010 | Collagen_trimer | Collagen trimerization domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR050149 | Family | Collagen superfamily | Interproscan |
| IPR013320 | Homologous_superfamily | Concanavalin A-like lectin/glucanase domain superfamily | Interproscan |
| IPR008160 | Repeat | Collagen triple helix repeat | Interproscan |
| IPR045463 | Domain | Collagen type XV/XVIII, trimerization domain | Interproscan |
| IPR048287 | Domain | Thrombospondin-like, N-terminal domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24023 | COLLAGEN ALPHA | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005615 | Cellular Component | extracellular space | Interproscan |
| GO:0030020 | Molecular Function | extracellular matrix structural constituent conferring tensile strength | Interproscan |
| GO:0030198 | Biological Process | extracellular matrix organization | Interproscan |
| GO:0031012 | Cellular Component | extracellular matrix | Interproscan |
| GO:0062023 | Cellular Component | collagen-containing extracellular matrix | Interproscan |
