Detailed information of scaffold370.g5.t5 in Aurelia aurita complex sp. Pacific

Genomic Location: scaffold370:42089...143614
NR annotation: no NCBI-NR hit recorded
Species Aurelia aurita complex sp. Pacific · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07699
all species →
Ephrin_rec_likeTyrosine-protein kinase ephrin type A/B receptor-like DomainInterproscan
PF13385
all species →
Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF00059
all species →
Lectin_CLectin C-type domainDomainInterproscan
PF14670
all species →
FXa_inhibitionCoagulation Factor Xa inhibitory siteDomainInterproscan
PF01390
all species →
SEASEA domainFamilyInterproscan
PF00084
all species →
SushiSushi repeat (SCR repeat)DomainInterproscan
PF07645
all species →
EGF_CACalcium-binding EGF domainDomainInterproscan
PF00431
all species →
CUBCUB domainDomainInterproscan
PF00008
all species →
EGFEGF-like domainDomainInterproscan
PF12661
all species →
hEGFHuman growth factor-like EGFDomainInterproscan
PF00057
all species →
Ldl_recept_aLow-density lipoprotein receptor domain class ARepeatInterproscan
PF02494
all species →
HYRHYR domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035914
all species →
Homologous_superfamilySpermadhesin, CUB domain superfamilyInterproscan
IPR035976
all species →
Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR000152
all species →
PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR000742
all species →
DomainEGF-like domainInterproscan
IPR000436
all species →
DomainSushi/SCR/CCP domainInterproscan
IPR036055
all species →
Homologous_superfamilyLDL receptor-like superfamilyInterproscan
IPR011641
all species →
DomainTyrosine-protein kinase ephrin type A/B receptor-likeInterproscan
IPR001304
all species →
DomainC-type lectin-likeInterproscan
IPR000082
all species →
DomainSEA domainInterproscan
IPR018097
all species →
Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR009030
all species →
Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR036364
all species →
Homologous_superfamilySEA domain superfamilyInterproscan
IPR003410
all species →
DomainHYR domainInterproscan
IPR000859
all species →
DomainCUB domainInterproscan
IPR001759
all species →
FamilyPentraxin-relatedInterproscan
IPR001881
all species →
DomainEGF-like calcium-binding domainInterproscan
IPR018378
all species →
Conserved_siteC-type lectin, conserved siteInterproscan
IPR049883
all species →
DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR002172
all species →
RepeatLow-density lipoprotein (LDL) receptor class A repeatInterproscan
IPR016187
all species →
Homologous_superfamilyC-type lectin foldInterproscan
IPR013032
all species →
Conserved_siteEGF-like, conserved siteInterproscan
IPR023415
all species →
Conserved_siteLow-density lipoprotein (LDL) receptor class A, conserved siteInterproscan
IPR013320
all species →
Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR016186
all species →
Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12916
all species →
CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0005509
all species →
Molecular Functioncalcium ion bindingInterproscan
GO:0005112
all species →
Molecular FunctionNotch bindingInterproscan
GO:0007219
all species →
Biological ProcessNotch signaling pathwayInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for scaffold370.g5.t5.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP