Gene detail

Detailed information of scaffold371.g13.t1 in Morbakka virulenta

Genomic Location: scaffold371:404786...406009
NR annotation: XP_004212338.2, tigger transposable element-derived protein 4-like [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q499M4	Tigger transposable element derived 5 OS=Mus musculus OX=10090 GN=Tigd5 PE=2 SV=1
Q6NT04	Tigger transposable element-derived protein 7 OS=Homo sapiens OX=9606 GN=TIGD7 PE=1 SV=1
B1WC39	Tigger transposable element derived 5 OS=Rattus norvegicus OX=10116 GN=Tigd5 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03221	HTH_Tnp_Tc5	Tc5 transposase DNA-binding domain	Domain	Interproscan
PF04218	CENP-B_N	CENP-B N-terminal DNA-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR006600	Domain	HTH CenpB-type DNA-binding domain	Interproscan
IPR007889	Domain	DNA binding HTH domain, Psq-type	Interproscan
IPR050863	Family	Centromere and Transposable Element-Derived Protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19303	TRANSPOSON	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K16166	PAP1, MYB75; transcription factor MYB75	-	Transcription factors	ko03000	deepkoala