Gene detail

Detailed information of scaffold38.g27.t1 in Morbakka virulenta

Genomic Location: scaffold38:954205...956793
NR annotation: XP_015762913.1, PREDICTED: uncharacterized protein LOC107341959 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

scaffold38.g27.t1

atggaaaaatacacacaagaacttaaaactggaaaattcatgttggaggattgcgaagaagccttagaacttgaagacagagaagacatcgagcttgcatatgaaaagatctgccgaataatgaaacaactggacaagtccaaggatgacgttacggaaaacatgttggaaaaggaggacactatcgataaagtgcgacaatggaaccaaatgcagaaagaagaaattaaaccgattcgtgaaatgcgcaagagattgaaggaaaaactggactggtttagcgatcaagaatcccgacagaagcaggagaaggaaatcgagctgcaaaagcaaattatggaggaaaagatccgcataaccttgaagaaagagaaggagatggaagaaatgaagatcagacagcagaagcgtgaggaagaatggtgtcgaaagaagctggagttggaaacagaagctgctgtgaaacgctgccaagaagagaaaggaaaggttcaatcagtgaaacttcagaagtacacgatcacgccgtttaaaggagagtacaaggactggttacgattttggaatcagtttaccgtggaagtcgatggatcgggaatctcagaaatcagcaaattcaactaccttttggaattggtaacaggaaagccgagagaagatatccttggactgccccacacaagagatggttatgaagaggccaagcggattttggaacaaacgtatggcagagatatcaagattcacaagactctgattaaagaattggaaagtttgccccacatcacaggtgttcacaagctgacagagatccacaacttttacaaccaccttgcaaggatcatccgaacactggtcaccatgaagaaactggagactgcccagagcttcgtgtattctctgatggataagttgggtcctgtgaaagaagccttgatacggaaagatgatgaatgggaagagtggaagctggaagagctggttgagaacctccggaaatacatcgatagaaatccactgccagaaacagacacggaaacctcgccatacccaaacctggtgaagaaaagaagcgaatttcaagactggagaaacaagcgggataagatgctatttgcgagtacccagaaaccccaaagaagaactcctggttgtgtatactgtggactgccgaaccatagaagtgtcgattgcttgaaggttttggacattgcagccagaaaggatatcctgaagaagagcagactgtgttttaattgcaccggatttggacacatggctaccaaatgcaattcccgaggatgcgggaaatgtaggcgaaaacaccacacatctatttgcgatgcagcaacagtgacaagttttccagcctcgaacgccccaagcccagatgcagaacaagggaaacgtgcgataaacaagaacacagcgatccatgcaaccgtagtagcgaaggtaaatggagtaactgctcgtataatgattgattctggttctgggagctcttacgtctgtacgagtctgttgacacaattgaagctcaagccatcaagaactgaaaacaggattatagagcagatgtatggaacagtgaccagaaaagtcgagatttacaaagtgaagatcacatcagacgtggtagaagactttcagatggagttggcttgcatcaatggggaaaaggagatcctgaccttcttaccgaacccaagaatcaaggccctgaagaagaaatatgatcgtttcagatgcctcagtttcagtgatgaagatgcaatggacgacatgctgccagttcacttgatattgggtacctctgacttccaaagaatcaggactgccgagccattggtattgggccctaaccctgaccgtgatcctggagcagagttcacaatgcttggctggacattgagtggaaaaacagtctgcagtgaatttggaacagaaaaagggttctttgcgaattccaccaaagatgagttcgaaaaaatgtgttcattggaagttcttggattgtctgatgaaaatggaaatgttgcagattttcatgaaaacttcaagaaaaacatcgaacgtatggatgatggaagtgctttccttcattaccagttcagtttgttgcatcccgtgtcccctgtttttctcaacatcttattccttactcagttgttattccttgttgaaataaaatccttttacgaatataattttcttcctcgaaATTTCCAATCACGAGGACTTTGA

Transcript

scaffold38.g27.t1

atcagatcagctcggataggatcagagaaatgtgagcataataataaatatcatacaattacacaagtgagttattttagtgtcacagggagttttctacaggaaaacagggctctatcagttcctaagaatattccccacactaaaagtggcgaccctgccaggacgagcaatggaaaaatacacacaagaacttaaaactggaaaattcatgttggaggattgcgaagaagccttagaacttgaagacagagaagacatcgagcttgcatatgaaaagatctgccgaataatgaaacaactggacaagtccaaggatgacgttacggaaaacatgttggaaaaggaggacactatcgataaagtgcgacaatggaaccaaatgcagaaagaagaaattaaaccgattcgtgaaatgcgcaagagattgaaggaaaaactggactggtttagcgatcaagaatcccgacagaagcaggagaaggaaatcgagctgcaaaagcaaattatggaggaaaagatccgcataaccttgaagaaagagaaggagatggaagaaatgaagatcagacagcagaagcgtgaggaagaatggtgtcgaaagaagctggagttggaaacagaagctgctgtgaaacgctgccaagaagagaaaggaaaggttcaatcagtgaaacttcagaagtacacgatcacgccgtttaaaggagagtacaaggactggttacgattttggaatcagtttaccgtggaagtcgatggatcgggaatctcagaaatcagcaaattcaactaccttttggaattggtaacaggaaagccgagagaagatatccttggactgccccacacaagagatggttatgaagaggccaagcggattttggaacaaacgtatggcagagatatcaagattcacaagactctgattaaagaattggaaagtttgccccacatcacaggtgttcacaagctgacagagatccacaacttttacaaccaccttgcaaggatcatccgaacactggtcaccatgaagaaactggagactgcccagagcttcgtgtattctctgatggataagttgggtcctgtgaaagaagccttgatacggaaagatgatgaatgggaagagtggaagctggaagagctggttgagaacctccggaaatacatcgatagaaatccactgccagaaacagacacggaaacctcgccatacccaaacctggtgaagaaaagaagcgaatttcaagactggagaaacaagcgggataagatgctatttgcgagtacccagaaaccccaaagaagaactcctggttgtgtatactgtggactgccgaaccatagaagtgtcgattgcttgaaggttttggacattgcagccagaaaggatatcctgaagaagagcagactgtgttttaattgcaccggatttggacacatggctaccaaatgcaattcccgaggatgcgggaaatgtaggcgaaaacaccacacatctatttgcgatgcagcaacagtgacaagttttccagcctcgaacgccccaagcccagatgcagaacaagggaaacgtgcgataaacaagaacacagcgatccatgcaaccgtagtagcgaaggtaaatggagtaactgctcgtataatgattgattctggttctgggagctcttacgtctgtacgagtctgttgacacaattgaagctcaagccatcaagaactgaaaacaggattatagagcagatgtatggaacagtgaccagaaaagtcgagatttacaaagtgaagatcacatcagacgtggtagaagactttcagatggagttggcttgcatcaatggggaaaaggagatcctgaccttcttaccgaacccaagaatcaaggccctgaagaagaaatatgatcgtttcagatgcctcagtttcagtgatgaagatgcaatggacgacatgctgccagttcacttgatattgggtacctctgacttccaaagaatcaggactgccgagccattggtattgggccctaaccctgaccgtgatcctggagcagagttcacaatgcttggctggacattgagtggaaaaacagtctgcagtgaatttggaacagaaaaagggttctttgcgaattccaccaaagatgagttcgaaaaaatgtgttcattggaagttcttggattgtctgatgaaaatggaaatgttgcagattttcatgaaaacttcaagaaaaacatcgaacgtatggatgatggaagtgctttccttcattaccagttcagtttgttgcatcccgtgtcccctgtttttctcaacatcttattccttactcagttgttattccttgttgaaataaaatccttttacgaatataattttcttcctcgaaATTTCCAATCACGAGGACTTTGAAAGTCGAAGAGAGATTTTGAAAACTTTGAAAAACATCCAACTATATGCCAACAATCTGCAGCAACACGAACCTTCGTAATTCTGCAATCTACTGATGTAGCTGAAATGAGAAACACAAGGGAAAAGAGACTGGAGCCAGTCAAAGTGTATACTAAATGGTCATCCTTGAG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03564	DUF1759	Protein of unknown function (DUF1759)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR021109	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan
IPR005312	Family	Protein of unknown function DUF1759	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22955	RETROTRANSPOSON	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan