Gene detail

Detailed information of scaffold388.g11.t1 in Morbakka virulenta

Genomic Location: scaffold388:618945...624661
NR annotation: KAG1696947.1, Transposable element Tcb2 transposase [Nymphon striatum]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q04202	Transposable element Tcb2 transposase OS=Caenorhabditis briggsae OX=6238 PE=3 SV=1
P03934	Transposable element Tc1 transposase OS=Caenorhabditis elegans OX=6239 GN=tc1a PE=3 SV=1
P35072	Transposable element Tcb1 transposase OS=Caenorhabditis briggsae OX=6238 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01498	HTH_Tnp_Tc3_2	Transposase	Family	Interproscan
PF13358	DDE_3	DDE superfamily endonuclease	Domain	Interproscan
PF13384	HTH_23	Homeodomain-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR047655	Family	Transposase IS630-like	Interproscan
IPR002492	Domain	Transposase, Tc1-like	Interproscan
IPR038717	Domain	Tc1-like transposase, DDE domain	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR052338	Family	Transposase_5	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23022	TRANSPOSABLE ELEMENT-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0006313	Biological Process	DNA transposition	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan