Detailed information of scaffold39.g53.t1 in Morbakka virulenta

Genomic Location: scaffold39:1566846...1649930
NR annotation: CAH3115229.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P97929Breast cancer type 2 susceptibility protein homolog OS=Mus musculus OX=10090 GN=Brca2 PE=1 SV=2
O35923Breast cancer type 2 susceptibility protein homolog OS=Rattus norvegicus OX=10116 GN=Brca2 PE=1 SV=1
Q7Y1C5Protein BREAST CANCER SUSCEPTIBILITY 2 homolog A OS=Arabidopsis thaliana OX=3702 GN=BRCA2A PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09169BRCA-2_helicalBRCA2, helicalDomainInterproscan
PF09103BRCA-2_OB1BRCA2, oligonucleotide/oligosaccharide-binding, domain 1DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015525FamilyBreast cancer type 2 susceptibility proteinInterproscan
IPR015252DomainBreast cancer type 2 susceptibility protein, helical domainInterproscan
IPR015187DomainBRCA2, OB1Interproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR036315Homologous_superfamilyBRCA2 helical domain superfamilyInterproscan
IPR002093RepeatBRCA2 repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11289BREAST CANCER TYPE 2 SUSCEPTIBILITY PROTEIN BRCA2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000724Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan

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