Gene detail

Detailed information of scaffold4.g158.t1 in Morbakka virulenta

Genomic Location: scaffold4:6863684...6903916
NR annotation: KAJ8382490.1, hypothetical protein SKAU_G00032680 [Synaphobranchus kaupii]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

scaffold4.g158.t1

gtaattggacaagtactactgatagaatacgagaagcagcaaagacagtcttgggggtaagcaaagggcgttagaagagggacaaagatacttggtggtggaatgacagagtgcaggatagtattaagatgaagagagaggcaaagaaaaagtttgatcattcagacagcgaggaggatcggagtgaatattgtgaaagaaggaagaaagcaaagcgagaggtagccaaggcaaaagaagtagcaatccaagccctttacaaccgtcttgacacaagggagggtgagaaggagctatacagaattgaaaaacaaaaagacaaggcttccaaatacattcaacatgtcagagtcataaaagatgaggacggacgactactcacaagggaagaggaagtattacaaaaatggacaagatactttgagaatttgatgaataccgagaacccaagggaaatgagggaagagactcaagagaaaaaggtccgtggagtggagaagataggcattggtgaagtgagaaaagcactgaagaaaatgaagaatgggaaggcagtgggtccggacgatattcccattgaagcgtggaaggcgctaggtagacaaggcctggaaatacttaccaatgtcttcaacctgctgatgtgtaatgcaatgaagctgtgggagagggttttggatgcaaggctgagggctgaggtggatatctgtgcacagcagtgtgggttcatgccaggtaggagtacatcagatgcgcaatttgcactgcgaatgctaatggaaaagtatggggaaggacagaaagagcttcattgtgtgttcatcgacttagagaaggcgtacgacagggtcccgagggatgagttatggtattgcacgaggaagtctggagtaacagagaagtatgtggaaatggtacaagatatgtataagaatagcatgactgcagtacggagtgccgctggattgactgactggttcgaggtgaaggtcggcctacaccaaggctcagccctaagcccctttctgtttgctatcattatggaccaattgacggaggatgtgaggatggaggagccctggaccatgctgtttgcagatgatattgtgctatgtaacacgacgagagatgaagcagaggaacaactggaaaggtggaggaacgccctggagaaaagaggcatgaaagttagcagagctaaaaccgaatatctggtcttgaatgggagaggggacgaagagataagaatgcaaagaacgatagtcaagagggtggacgaattcaagtatcttgggtccacagtacagagcaatggaggctgtgacagagaagtgataaaacgaatacaggcgggatggaacggatggaggaaagtttcgggtgttttttgcgataggaagatatctccgaagcatatttttcgactggagccaggaccggtactccaggtcgcggtccttggtgacccgcgcgacgaccgatgcgacaaattgctacaacacattatgctacagattatatgctacataccaaaagtgctacaggacatatttgctacatactaactgctacagccatatttgctacattgcatttgctacagccatatttgatacattgcatttgctaccgcttttttgctacattgctttctctatagccatctttgctacatttcctatcggattggtctgaagtttcgatacatttatttcacttgatgagttccacatgtttattcaatgataactntttccatttcaagtgtggttattaaaattagtaaaattcaacagaaaatgtataaacaatgctctgacattgcattgcaatgcgtgttcaaacattacttcgtagttatgtaaaacggtccaagcattattctgtactgctagtgtatcaatagcattttctttttgtagcaaagtatgcctgtagcaataccgtctcgtagcaattttatttgtagcatttcttatttgtagcagaaagtgactgtagcaaatccatattgtagcaattatgttctgtagcaatctgtcggtagcaatttgtcgcgctcccAATTCAATTTTCACATTTTAAGCAAAAAATCCACTGTATTGAC

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46238	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04633	GNAL; guanine nucleotide-binding protein G(olf) subunit alpha	-	GTP-binding proteins	ko04031	deepkoala