Gene detail

Detailed information of scaffold409.g9.t2 in Aurelia aurita

Genomic Location: scaffold409:103378...118355
NR annotation: no NCBI-NR hit recorded
Species Aurelia aurita · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

scaffold409.g9.t2

gtcgattgctgggatggtccaaacggcgaaccaattatttaccatggcagaacattaacaagtcgtataacattctacgatgcattagtctcaattgaagagcatgcctttgaaacgtcagattatccagtaatactttcaatcgagaatcactgcagtacaaaacaacagaaagtcatggctgaatatttagttgaagtttttaaagatatgctgtacacggaatcagtcagcgaggatcttcagcatttgccatctccagaatctcttaagaggaaggttttagtcaagaataaaaagttgccaacctcactttcatgcgacgaaggcgaggtcagcgaggaagaagaagacgattccgtggtatacagtaatgggaatggacaagagaaaactattaacgaaaatgaagccaaaaatggtgcattgggctttcctcacaaaaataaaacttccgtggcaaagcaacctgacgagaactcacatcacaagacgatgaaactagcgaaagaattatctgatctcgtcattgtatgcaaatcaatccgatttcgatctctccaatattcacttgaaaatcagaaatattgggagatgtgttcaattggagaggcgacagctcgacgtttgtgccaaagtgctccagaagaatttattagttacaataaaagatttctttgtcgaatttatccagctgggaaaagagtagattcaagtaatttcaatcctcaagaattttggaattgtggatgccagcttgttgcgttaaattaccaatatcccggtttatcagtggatttgaaccgtggaagattcttacaaaatggtagaagtggttatgtcctaaaaccagcagttctacgagaagaagttgcatattatagtccgcacatgaaaggtgaaattcccggcaattgctcgtttaatgtacagctgaagataatcagcggtcatcagtttccaaagcccaaaggatcaacagcaaaaggagatgacgttgatccatttgttgttcttgaggtgcatgggatacctgcagattcaaaaacattcaaaacaaggaccgtcccccacaatggtttcaatccagtatttgatgagacattcgaattccacgtcaacttaccagaaattgcattgcttagatttgtcgttttggatgatgattttatcggggatggcttcgttggtcaattcacaatgcctgtcgactgcttgcaatcaggatacagaatggttaaactgttatcaaatactggagaatcattatcacctgcatcgctatttgttcatgtgaatttaacaaagtctttcgaaatgccatcactgaagattcaacgcttcccattcgtgaaatcattacgaaaaaacaaagagtatacaagtttgaaatctgttggaataaaagcaatagatgatacatttaagttttcaattcaacccctacgagaagcaactatacttcgagaaaactttcaaacgagtttaaatatgtttaaggaatgttgtggtctttcaccgcgttcaaatttaaagcagtgtattcggttattatcaaagcgagttatggatcttgcaagtgtaaatatggaaattgtcattagccaagagtacccctgtctacaaatagagggtgatctccctccacatttacagcgagcaattacagcttacgaacagggtattccacagcatagctcccctaaatctcagggagtttatcccatattttattgtgtgagacctctgaggaagttcgcataaaacttgcttacctattagatgaaagtcgatcattgattgaaaactcaagcaatgtctttcaaaagttgaatcacgcaagaagaggtgctttggaatggcatgagaccttaccaagtctttgtgcaagggacaagctgaaagaaacaagaacagcgaaggtaatggaaaacttttcatggaacgtgcgagtaatgaaaggacaagctgatctactgaaatctacgtcatcgcaatgtcaagattatcttaggcagatccatgaagcagcatcaacagctggcttggtcaagtcatattcctacagtctgtgatttgaccaccgacagaaattcaagctcattccagctatatacgtgagtttatcaacacccaccgcagaattcgccgcagcgcaggtagaattgattctatgcgcacatcaaatattatcatacagtatctgcgatgaactgccaaatacaatagaacctaccaacttttgattcttctattctctggcctaccagagcgactggcttatccaagaataaatactgaagaacaaaatctgtaaaatgaatgactgtacatttttataaaaccaaccaactatttctatttctgtcaacaatgatgacagtcaccagcaagcccgccgagagatcttcgtgtcctaaaatttacacttttatttctgcaattttaataatttgtcattgatttgttcttctttttttgcactatcatatttcggtgtgccttgacaaaacataatagttaaactaaaaattcaattaaaatcacagttctaagccatttgagattagacgtaagtagcgagaggtagtgcccgtttcacacccttgaatcctgtattccaaaattttgcagcacgtagcaatctcggttcggcgggtctggtcattttaatcctagagcttcggaatatataataatgtcaactcaactagtgccttttaaaggcataattttgactaatagtatgtttcagaattttttcacgactgtatcgtaacaaccgaattattgtatttagctcattaattcgacaatttggattgagccctatcgtgtggaataggtgtaattttgtcattatccccatccctgtctcagtgtccccatttcccatcccccccaaatcaaacggcatggaaacttcagttttgccttcatgtagggaataatatgcgattctgtactcgtaactcatccagtttatgaccaatgttttgatatgattaaaagattgctgcctctgtggcttcagattgctcattgcaggaaagcataaagtttcttaaagtttcctatcagttatgatctaaaaatcagaaacttatttccctcaaaatttctgacagaaagtgcttgtgatgtgagctcacatgagacagctttggttgccttctaaagtctttttagaagcattacaaacaggggcggcaccagccgccaaaaagtggggtggacacgcgagcggagcgagcaaaaaatgggggtctgggggcttgcccccagaaatgtttttaggaccacgccctctagaacgtcggaaaacgcccttttgctagatataatgcaaatttgtgttctttgaatttcgtcattgatttgacatgttagattttatttgcaagccttaatttacttcaaactacaagcgagaaaggaaaaagagggaaacgaacgaattagaaaatcgatcctgaaaaaaagtggggtggacatgtccaccccagtccacccggtggcgccgcccctgattacaaaatagttttaagtggagaaatttatctcggtagcctttaatcactacatttagctgaagtggggaagccttctgaaaagatttcgtcagtgagtgatacatcgatgaatcagtaaatctatcaatcaatccattaactttgttagtcagtcagtcatgttcatttatgcttcacagagtcgggaatgaaagaccctcggaaagaacctaactatctaggtccaaaatactttgaatttgaatcccaagatccaaaagaagcttcaaattgcaagtttcaaaatactttgagttgtgtaagagagcccgatgacccgtgcaggtaaacatcgccaaagcaacttgtaagtcataaagaagcccctatgtaaatttcaaaaccccttgaattcaaacaagaaccccaggacccgtgcaggtaaacatcgtcaaagcaactcttaagtcataaagaagcccctatgtaagttttaaaaccccttgaattcaaatcaggagccccaggacccgcgcaggtaaacatcgtcaaaagcaacttgtcagtcataaagaagcccctatgtaaatttcaaaaccccttgaattcaaacaagagtcccttgacccgtgcaggtaaatgttttaaaaagcgaactgtaaatatgttgatatatttattttttatgttctattttggattatttattaaatgaaaacaatcttgattaaaatgtgaaataattctacaaatacatcgagtcgacttac

Transcript

scaffold409.g9.t2

GTCGATTGCTGGGATGGTCCAAACGGCGAACCAATTATTTACCATGGCAGAACATTAACAAGTCGTATAACATTCTACGATGCATTAGTCTCAATTGAAGAGCATGCCTTTGAAACGTCAGATTATCCAGTAATACTTTCAATCGAGAATCACTGCAGTACAAAACAACAGAAAGTCATGGCTGAATATTTAGTTGAAGTTTTTAAAGATATGCTGTACACGGAATCAGTCAGCGAGGATCTTCAGCATTTGCCATCTCCAGAATCTCTTAAGAGGAAGGTTTTAGTCAAGAATAAAAAGTTGCCAACCTCACTTTCATGCGACGAAGGCGAGGTCAGCGAGGAAGAAGAAGACGATTCCGTGGTATACAGTAATGGGAATGGACAAGAGAAAACTATTAACGAAAATGAAGCCAAAAATGGTGCATTGGGCTTTCCTCACAAAAATAAAACTTCCGTGGCAAAGCAACCTGACGAGAACTCACATCACAAGACGATGAAACTAGCGAAAGAATTATCTGATCTCGTCATTGTATGCAAATCAATCCGATTTCGATCTCTCCAATATTCACTTGAAAATCAGAAATATTGGGAGATGTGTTCAATTGGAGAGGCGACAGCTCGACGTTTGTGCCAAAGTGCTCCAGAAGAATTTATTAGTTACAATAAAAGATTTCTTTGTCGAATTTATCCAGCTGGGAAAAGAGTAGATTCAAGTAATTTCAATCCTCAAGAATTTTGGAATTGTGGATGCCAGCTTGTTGCGTTAAATTACCAATATCCCGGTTTATCAGTGGATTTGAACCGTGGAAGATTCTTACAAAATGGTAGAAGTGGTTATGTCCTAAAACCAGCAGTTCTACGAGAAGAAGTTGCATATTATAGTCCGCACATGAAAGGTGAAATTCCCGGCAATTGCTCGTTTAATGTACAGCTGAAGATAATCAGCGGTCATCAGTTTCCAAAGCCCAAAGGATCAACAGCAAAAGGAGATGACGTTGATCCATTTGTTGTTCTTGAGGTGCATGGGATACCTGCAGATTCAAAAACATTCAAAACAAGGACCGTCCCCCACAATGGTTTCAATCCAGTATTTGATGAGACATTCGAATTCCACGTCAACTTACCAGAAATTGCATTGCTTAGATTTGTCGTTTTGGATGATGATTTTATCGGGGATGGCTTCGTTGGTCAATTCACAATGCCTGTCGACTGCTTGCAATCAGGATACAGAATGGTTAAACTGTTATCAAATACTGGAGAATCATTATCACCTGCATCGCTATTTGTTCATGTGAATTTAACAAAGTCTTTCGAAATGCCATCACTGAAGATTCAACGCTTCCCATTCGTGAAATCATTACGAAAAAACAAAGAGTATACAAGTTTGAAATCTGTTGGAATAAAAGCAATAGATGATACATTTAAGTTTTCAATTCAACCCCTACGAGAAGCAACTATACTTCGAGAAAACTTTCAAACGAGTTTAAATATGTTTAAGGAATGTTGTGGTCTTTCACCGCGTTCAAATTTAAAGCAGTGTATTCGGTTATTATCAAAGCGAGTTATGGATCTTGCAAGTGTAAATATGGAAATTGTCATTAGCCAAGAGTACCCCTGTCTACAAATAGAGGGTGATCTCCCTCCACATTTACAGCGAGCAATTACAGCTTACGAACAGggtattccacagcatagctcccctaaatctcagggagtttatcccatattttattgtgtgagacctctgaggaagttcgcataaaacttgcttacCTATTAGATGAAAGTCGATCATTGATTGAAAACTCAAGCAATGTCTTTCAAAAGTTGAATCACGCAAGAAGAGGTGCTTTGGAATGGCATGAGACCTTACCAAGTCTTTGTGCAAGGGACAAGCTGAAAGAAACAAGAACAGCGAAGGTAATGGAAAACTTTTCATGGAACGTGCGAGTAATGAAAGGACAAGCTGATCTACTGAAATCTACGTCATCGCAATGTCAAGATTATCTTAGGCAGATCCATGAAGCAGCATCAACAGCTGGCTTGGTCAAGTCATATTCCTACAGTCTGTGATTTGACCACCGACAGAAATTCAAGCTCATTCCAGCTATATACGTGAGTTTATCAACACCCACCGCAGAATTCGCCGCAGCGCAGGTAGAATTGATTCTATGCGCACATCAAATATTATCATACAGTATCTGCGATGAACTGCCAAATACAATAGAACCTACCAACTTTTGATTCTTCTATTCTCTGGCCTACCAGAGCGACTGGCTTATCCAAGAATAAATACTGAAGAACAAAATCTGTAAAATGAATGACTGTACATTTTTATAAAACCAACCAACTATTTCTATTTCTGTCAACAATGATGACAGTCACCAGCAAGCCCGCCGAGAGATCTTCGTGTCCTAAAATTTACACTTTTATTTCTGCAATTTTAATAATTTGTCATTGATTTGTTCTTCTTTTTTTGCACTATCATATTTCGGTGTGCCTTGACAAAACATAATAGTTAAACTAAAAATTCAATTAAAATCACAGTTCTAAGCCATTTGAGATTAGACGTAAGTAGCGAGAGGTAGTGCCCGTTTCACACCCTTGAATCCTGTATTCCAAAATTTTGCAGCACGTAGCAATCTCGGTTCGGCGGGTCTGGTCATTTTAATCCTAGAGCTTCGGAATATATAATAATGTCAACTCAACTAGTGCCTTTTAAAGGCATAATTTTGACTAATAGTATGTTTCAGAATTTTTTCACGACTGTATCGTAACAACCGAATTATTGTATTTAGCTCATTAATTCGACAATTTGGATTGAGCCCTATCGTGTGGAATAGGTGTAATTTTGTCATTATCCCCATCCCTGTCTCAGTGTCCCCATTTCCCATCCCCCCCAAATCAAACGGCATGGAAACTTCAGTTTTGCCTTCATGTAGGGAATAATATGCGATTCTGTACTCGTAACTCATCCAGTTTATGACCAATGTTTTGATATGATTAAAAGATTGCTGCCTCTGTGGCTTCAGATTGCTCATTGCAGGAAAGCATAAAGTTTCTTAAAGTTTCCTATCAGTTATGATCTAAAAATCAGAAACTTATTTCCCTCAAAATTTCTGACAGAAAGTGCTTGTGATGTGAGCTCACATGAGACAGCTTTGGTTGCCTTCTAAAGTCTTTTTAGAAGCATTACAAAcaggggcggcaccagccgccaaaaagtggggtggacacgcgagcggagcgagcaaaaaatgggggtctgggggcttgcccccagaaatgtttttaggaccacgccctctagaacgtcggaaaacgcccttttgctagatataatgcaaatttgtgttctttgaatttcgtcattgatttgacatgttagattttatttgcaagccttaatttacttcaaactacaagcgagaaaggaaaaagagggaaacgaacgaattagaaaatcgatcctgaaaaaaagtggggtggacatgtccaccccagtccacccggtggcgccgcccctgATTACAAAATAGTTTTAAGTGGAGAAATTTATCTCGGTAGCCTTTAATCACTACATTTAGCTGAAGTGGGGAAGCCTTCTGAAAAGATTTCGTCAGTGAGTGATACATCGATGAATCAGTAAATCTATCAATCAATCCATTAACTTTGTTAGTCAGTCAGTCATGTTCATTTATGCTTCACAGAGTCGGGAATGAAAGACCCTCGGAAAGAACCTAACTATCTAGGTCCAAAATACTTTGAATTTGAATCCCAAGATCCAAAAGAAGCTTCAAATTGCAAGTTTCAAAATACTTTGAGTTGTGTAAGAGAGCCCGATGACCCGTGCAGGTAAACATCGCCAAAGCAACTTGTAAGTCATAAAGAAGCCCCTATGTAAATTTCAAAACCCCTTGAATTCAAACAAGAACCCCAGGACCCGTGCAGGTAAACATCGTCAAAGCAACTCTTAAGTCATAAAGAAGCCCCTATGTAAGTTTTAAAACCCCTTGAATTCAAATCAGGAGCCCCAGGACCCGCGCAGGTAAACATCGTCAAAAGCAACTTGTCAGTCATAAAGAAGCCCCTATGTAAATTTCAAAACCCCTTGAATTCAAACAAGAGTCCCTTGACCCGTGCAGGTAAATGTTTTAAAAAGCGAACTGTAAATATGTTGATATATTTATTTTTTATGTTCTATTTTGGATTATTTATTAAATGAAAACAATCTTGATTAAAATGTGAAATAATTCTACAAATACATCGAGTCGACTTAC

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00168 all species →	C2	C2 domain	Domain	Interproscan
PF00387 all species →	PI-PLC-Y	Phosphatidylinositol-specific phospholipase C, Y domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001711 all species →	Domain	Phospholipase C, phosphatidylinositol-specific, Y domain	Interproscan
IPR000008 all species →	Domain	C2 domain	Interproscan
IPR035892 all species →	Homologous_superfamily	C2 domain superfamily	Interproscan
IPR017946 all species →	Homologous_superfamily	PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily	Interproscan
IPR001192 all species →	Family	Phosphoinositide phospholipase C family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10336 all species →	PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004435 all species →	Molecular Function	phosphatidylinositol phospholipase C activity	Interproscan
GO:0006629 all species →	Biological Process	lipid metabolic process	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan
GO:0035556 all species →	Biological Process	intracellular signal transduction	Interproscan
GO:0008081 all species →	Molecular Function	phosphoric diester hydrolase activity	Interproscan
GO:0048015 all species →	Biological Process	phosphatidylinositol-mediated signaling	Interproscan
GO:0051209 all species →	Biological Process	release of sequestered calcium ion into cytosol	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for scaffold409.g9.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.