Detailed information of scaffold44.g81.t1 in Morbakka virulenta

Genomic Location: scaffold44:3244957...3280870
NR annotation: KAG1696947.1, Transposable element Tcb2 transposase [Nymphon striatum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A2AIR5Glutamate receptor ionotropic, NMDA 3A OS=Mus musculus OX=10090 GN=Grin3a PE=1 SV=1
Q9R1M7Glutamate receptor ionotropic, NMDA 3A OS=Rattus norvegicus OX=10116 GN=Grin3a PE=1 SV=1
A7XY94Glutamate receptor ionotropic, NMDA 2B OS=Xenopus laevis OX=8355 GN=grin2b PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13358DDE_3DDE superfamily endonucleaseDomainInterproscan
PF01498HTH_Tnp_Tc3_2TransposaseFamilyInterproscan
PF10613Lig_chan-Glu_bdLigated ion channel L-glutamate- and glycine-binding siteDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR001320DomainIonotropic glutamate receptor, C-terminalInterproscan
IPR038717DomainTc1-like transposase, DDE domainInterproscan
IPR002492DomainTransposase, Tc1-likeInterproscan
IPR019594DomainIonotropic glutamate receptor, L-glutamate and glycine-binding domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR047655FamilyTransposase IS630-likeInterproscan
IPR052338FamilyTransposase_5Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23022TRANSPOSABLE ELEMENT-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0015276Molecular Functionligand-gated monoatomic ion channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006313Biological ProcessDNA transpositionInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

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