Detailed information of scaffold44.g87.t2 in Aurelia aurita

Genomic Location: scaffold44:1156557...1201733
NR annotation: no NCBI-NR hit recorded
Species Aurelia aurita · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07679
all species →
I-setImmunoglobulin I-set domainDomainInterproscan
PF00047
all species →
igImmunoglobulin domainDomainInterproscan
PF19030
all species →
TSP1_ADAMTSThrombospondin type 1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007110
all species →
DomainImmunoglobulin-like domainInterproscan
IPR036179
all species →
Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR013098
all species →
DomainImmunoglobulin I-setInterproscan
IPR013783
all species →
Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR010909
all species →
DomainPLACInterproscan
IPR000884
all species →
RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR003599
all species →
DomainImmunoglobulin subtypeInterproscan
IPR036383
all species →
Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR003598
all species →
DomainImmunoglobulin subtype 2Interproscan
IPR013151
all species →
DomainImmunoglobulinInterproscan
IPR050958
all species →
FamilyCell Adhesion and Cytoskeletal OrganizationInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45080
all species →
CONTACTIN 5Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005886
all species →
Cellular Componentplasma membraneInterproscan
GO:0007156
all species →
Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0008046
all species →
Molecular Functionaxon guidance receptor activityInterproscan
GO:0030424
all species →
Cellular ComponentaxonInterproscan
GO:0043025
all species →
Cellular Componentneuronal cell bodyInterproscan
GO:0050808
all species →
Biological Processsynapse organizationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for scaffold44.g87.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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