Gene detail

Detailed information of scaffold447.g11.t1 in Morbakka virulenta

Genomic Location: scaffold447:471219...528979
NR annotation: XP_027055491.1, ubiquitin carboxyl-terminal hydrolase 5-like [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
P45974	Ubiquitin carboxyl-terminal hydrolase 5 OS=Homo sapiens OX=9606 GN=USP5 PE=1 SV=2
P56399	Ubiquitin carboxyl-terminal hydrolase 5 OS=Mus musculus OX=10090 GN=Usp5 PE=1 SV=1
Q5R407	Ubiquitin carboxyl-terminal hydrolase 5 OS=Pongo abelii OX=9601 GN=UBP5 PE=2 SV=1

Gene family	Subfamily
Ubiquitin Family	DUB\|USP\|USP
Ubiquitin Family	UBD\|ZnF\|ZnF_UBP

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00443	UCH	Ubiquitin carboxyl-terminal hydrolase	Family	Interproscan
PF17807	zf-UBP_var	Variant UBP zinc finger	Domain	Interproscan
PF02148	zf-UBP	Zn-finger in ubiquitin-hydrolases and other protein	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR028889	Domain	Ubiquitin specific protease domain	Interproscan
IPR001607	Domain	Zinc finger, UBP-type	Interproscan
IPR001394	Domain	Peptidase C19, ubiquitin carboxyl-terminal hydrolase	Interproscan
IPR041432	Domain	Ubiquitinyl hydrolase, variant UBP zinc finger	Interproscan
IPR038765	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan
IPR050185	Family	Ubiquitin carboxyl-terminal hydrolase	Interproscan
IPR018200	Conserved_site	Ubiquitin specific protease, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21646	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0004843	Molecular Function	cysteine-type deubiquitinase activity	Interproscan
GO:0016579	Biological Process	protein deubiquitination	Interproscan