Detailed information of scaffold455.g11.t1 in Morbakka virulenta

Genomic Location: scaffold455:315876...353897
NR annotation: XP_027037518.1, DNA polymerase theta-like [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8CGS6DNA polymerase theta OS=Mus musculus OX=10090 GN=Polq PE=1 SV=2
O75417DNA polymerase theta OS=Homo sapiens OX=9606 GN=POLQ PE=1 SV=2
O18475DNA polymerase theta OS=Drosophila melanogaster OX=7227 GN=PolQ PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20470HTH_61Helix-turn-helix domainDomainInterproscan
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF01612DNA_pol_A_exo13'-5' exonucleaseDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00476DNA_pol_ADNA polymerase family AFamilyInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF21099POLQ_helicalDNA_pol_Q helicase like region helical domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002298FamilyDNA polymerase AInterproscan
IPR046931DomainDNA polymerase theta-like, helix-turn-helix domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR019760Conserved_siteDNA-directed DNA polymerase, family A, conserved siteInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR002562Domain3'-5' exonuclease domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR001098DomainDNA-directed DNA polymerase, family A, palm domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR048960DomainPOLQ-like, helical domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10133DNA POLYMERASE IInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003887Molecular FunctionDNA-directed DNA polymerase activityInterproscan
GO:0006261Biological ProcessDNA-templated DNA replicationInterproscan
GO:0006302Biological Processdouble-strand break repairInterproscan
GO:0097681Biological Processdouble-strand break repair via alternative nonhomologous end joiningInterproscan
GO:0006260Biological ProcessDNA replicationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006139Biological Processnucleobase-containing compound metabolic processInterproscan
GO:0008408Molecular Function3'-5' exonuclease activityInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02349POLQ; DNA polymerase thetaEC:2.7.7.7
DNA repair and recombination proteinsko03400deepkoala

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