Detailed information of scaffold47.g41.t1 in Morbakka virulenta

Genomic Location: scaffold47:1394040...1453826
NR annotation: KAJ8254673.1, hypothetical protein GJAV_G00195910 [Gymnothorax javanicus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O75330Hyaluronan mediated motility receptor OS=Homo sapiens OX=9606 GN=HMMR PE=1 SV=2
Q00547Hyaluronan mediated motility receptor OS=Mus musculus OX=10090 GN=Hmmr PE=1 SV=4
P97779Hyaluronan-mediated motility receptor OS=Rattus norvegicus OX=10116 GN=Hmmr PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF15908HMMR_CHyaluronan mediated motility receptor C-terminalCoiled-coilInterproscan
PF15905HMMR_NHyaluronan mediated motility receptor N-terminalCoiled-coilInterproscan
PF00447HSF_DNA-bindHSF-type DNA-bindingDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR000232DomainHeat shock factor (HSF)-type, DNA-bindingInterproscan
IPR026203FamilyIntracellular hyaluronic acid binding proteinInterproscan
IPR031794DomainHyaluronan-mediated motility receptor, C-terminalInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18956HYALURONAN MEDIATED MOTILITY RECEPTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0005540Molecular Functionhyaluronic acid bindingInterproscan

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