Detailed information of scaffold48.g71.t2 in Aurelia aurita

Genomic Location: scaffold48:966040...975582
NR annotation: no NCBI-NR hit recorded
Species abbreviation AAURI1 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Ubiquitin familyE3|E3 activity|RBR · all ubiquitin genes in this species

 Pfam domain
No Pfam domain signature was detected for scaffold48.g71.t2. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR017907
all species →		Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR001841
all species →		DomainZinc finger, RING-typeInterproscan
IPR008405
all species →		FamilyApolipoprotein LInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14096
all species →		APOLIPOPROTEIN LInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005576
all species →		Cellular Componentextracellular regionInterproscan
GO:0006869
all species →		Biological Processlipid transportInterproscan
GO:0008289
all species →		Molecular Functionlipid bindingInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0042157
all species →		Biological Processlipoprotein metabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for scaffold48.g71.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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