Detailed information of scaffold481.g3.t1 in Morbakka virulenta

Genomic Location: scaffold481:90416...112904
NR annotation: XP_029197802.2, U11/U12 small nuclear ribonucleoprotein 35 kDa protein-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q4KMD3U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Danio rerio OX=7955 GN=snrnp35 PE=2 SV=1
Q05AT9U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Xenopus laevis OX=8355 GN=snrnp35 PE=2 SV=1
Q1LZH0U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Bos taurus OX=9913 GN=SNRNP35 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000504DomainRNA recognition motif domainInterproscan
IPR051183FamilyU1 snRNP 70 kDa and U11/U12 snRNP 35 kDaInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13952U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005689Cellular ComponentU12-type spliceosomal complexInterproscan
GO:0017069Molecular FunctionsnRNA bindingInterproscan
GO:0071011Cellular Componentprecatalytic spliceosomeInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13155SNRNP35; U11/U12 small nuclear ribonucleoprotein 35 kDa protein-Spliceosomeko03041deepkoala

TOP