Genomic Location: scaffold50:1605334...1627693
NR annotation: KAI5106751.1, hypothetical protein C0J45_2389 [Silurus meridionalis]
| CDS | ||||
| scaffold50.g47.t1 | ||||
| Transcript |
| scaffold50.g47.t1 |
| Protein |
| scaffold50.g47.t1 |
| Uniprot term | Description |
|---|---|
| Q2YDE4 | Proteasome subunit alpha type-6 OS=Bos taurus OX=9913 GN=PSMA6 PE=1 SV=1 |
| P60900 | Proteasome subunit alpha type-6 OS=Homo sapiens OX=9606 GN=PSMA6 PE=1 SV=1 |
| P60901 | Proteasome subunit alpha type-6 OS=Rattus norvegicus OX=10116 GN=Psma6 PE=1 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00078 | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Domain | Interproscan |
| PF03372 | Exo_endo_phos | Endonuclease/Exonuclease/phosphatase family | Domain | Interproscan |
| PF00227 | Proteasome | Proteasome subunit | Domain | Interproscan |
| PF10584 | Proteasome_A_N | Proteasome subunit A N-terminal signature | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036691 | Homologous_superfamily | Endonuclease/exonuclease/phosphatase superfamily | Interproscan |
| IPR000477 | Domain | Reverse transcriptase domain | Interproscan |
| IPR000426 | Domain | Proteasome alpha-subunit, N-terminal domain | Interproscan |
| IPR029055 | Homologous_superfamily | Nucleophile aminohydrolases, N-terminal | Interproscan |
| IPR005135 | Domain | Endonuclease/exonuclease/phosphatase | Interproscan |
| IPR001353 | Family | Proteasome, subunit alpha/beta | Interproscan |
| IPR043502 | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR043128 | Homologous_superfamily | Reverse transcriptase/Diguanylate cyclase domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46238 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0006511 | Biological Process | ubiquitin-dependent protein catabolic process | Interproscan |
| GO:0019773 | Cellular Component | proteasome core complex, alpha-subunit complex | Interproscan |
| GO:0003824 | Molecular Function | catalytic activity | Interproscan |
| GO:0005839 | Cellular Component | proteasome core complex | Interproscan |
| GO:0051603 | Biological Process | proteolysis involved in protein catabolic process | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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