Gene detail

Detailed information of scaffold53.g32.t1 in Morbakka virulenta

Genomic Location: scaffold53:1231220...1263076
NR annotation: XP_020619828.1, electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

scaffold53.g32.t1

GATTTGAATCACGCAAACAAGCTGGAGTCATTAAATTGGCCAACATAGAGGATGAACCATTACCATCAGGTTACTAAAATGTTGAAGTCAATAAGGAGGATAAGAACTGTTTACGGACCACTTCAGAGATTTTCTAGATGCAGATGTGCAGCTGCAACAACAGAGAATGAAGGTAGCACAAAGAAAATAACTACACATTATACAGTTGTCCCAAGAGAAAATGATCCAAGATGGAAAGATGTTGATATGGAAAGAGTCGCTGATGAAGCAGATGTTATTATTGTTGGTGGAGGTCCTGCTGGTTTGTCCTCTGCCATCAAGCTTAGACAACTGGCCATAGAAAATGACCAGGACATTAGGGTTTGCGTTGTTGAAAAAGCATCAGAAATAGGTGGACATACATTGTCAGGAGCATGCATTGAAACAGCTGCACTGGATGAGTTAATTCCAGACTGGGCAGAAAAAGGGGCACCATTAAATACTCCTGTTACAAAAGATAGATTTGGAATTTTAACAGAAAAGAGAAGGATACCTATACCAATATTTAAAGGTTTACCTATGTATAACCATGGTAATTACCTTGTAAGACTAGGAAAATTCGTAAGTTGGCTTGGCGAACAAGCTGAAGAACTAGGTGTTGAGATCTACCCAGGAATAGCAGCAAGTGAGGTTTTGTATCATGACGATGGAAGTGTAAAAGGAATTGCGACAACTGATGTTGGAATCCATAAAGATGGCTCCCCGAAGGATACATTTGAAAGAGGTATGGAACTACACGGGAAGGTGACAATATTTGGTGAAGGTTGCCATGGACACTTGGCAAAGTATTTATACAAACAGTTTAATCTCAGGGACAATTGCGAACCACAGACGTATGGGATCGGCATAAAAGAGCTCTGGGAAGTAGATCCTGCAAAGCATGTACCTGGCCTTGTGGATCACACAGCAGGATGGCCATTGACTAGAAACATGTATGGAGGATCATTTATTTACCACTTAAATGACGAAACACCTTTGGTAGCGGTTGGTTTTGTAGTTGGTTTAGACTATGATAATCCATATGTCAGTCCGTTTAAAGAATTTCAGAGATTTAAGCAGCATCCGTCAGTTAGACCGCTCTTTGAAGGAGGAAAGAGAATTGCATATGGAGCACGTGCTTTGAATGAGGGCGGACTTCAGTCAATCCCGAAGTTAACATTTCCTGGAGGATGCCTGATAGGTTGCAGTCCTGGGTTTATGAATGTTCCAAAAATTAAAGGAACGCATACAGCAATGAAAAGCGGAATGTTAGCTGCAGAATCTATATATGAAGTTTTAACTGATGAGAACTTAAACAGTGAGACAGAAGGTTTGGATCCCAAATCCTATGAAGAACGATTGAAGAATAGCTGGGTCTACGACGAACTTAAAGCAGTGCGTAATATTCGCCCATCCGCACATTCAGTATTTGGTCTTTATGGGATGATCGCTTACACTGGTGTCTTCTATTTTCTTGGACGTGGAAAAGAGCCCTGGACATTTTCGCATGGTACACCTGACTACCAGAGGCTTAAACCAGCAACAGAGTGCAAACCAATTGTTTACCCTAAACCAGATAACGAAGTCTCTTTTGATTTACTTTCGTCCGTAGCTCTCAGTGGTACTAACCATGATCATGACCAACCAGCACATTTAACTTTAAGGAATGACGACATCCCAGTCGAACGAAATTATAATATTTTTAATGGACCAGAACAACGCTTTTGCCCAGCAGGAGTATATGAATATGTTGATGATGAGGAAACTGGAGGAAAGCGGTTACAGATAAATGCCCAGAATTGTGTCCATTGCAAAACTTGTGATATAAAGGATCCAAGTCAAAATATTAATTGGGTAGTTCCAGAAAGCGGAGGTGGGCCTGCATATAATGGGATGTGATATTTAATCTTTTTTATTTGTTGTATTCAGGGTCCCATTTTCTATACTATCATCGCCATACGTCCGCAATGGTTTTTACCAAAACCCACAGAAAAGTAATGATTGAGCTACGTCAACTGCGACACACATTAGGTATTTCTCTTTGTAACAAAGTAACACTAAGAAAATCATTTGTTGCAC

Protein

Uniprot

Uniprot term	Description
Q16134	Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Homo sapiens OX=9606 GN=ETFDH PE=1 SV=2
Q2KIG0	Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Bos taurus OX=9913 GN=ETFDH PE=2 SV=1
Q5RDD3	Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Pongo abelii OX=9601 GN=ETFDH PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21162	ETFQO_UQ-bd	ETF-QO, ubiquinone-binding	Domain	Interproscan
PF05187	ETF_QO	Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S	Family	Interproscan
PF13450	NAD_binding_8	NAD(P)-binding Rossmann-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017896	Domain	4Fe-4S ferredoxin-type, iron-sulphur binding domain	Interproscan
IPR036188	Homologous_superfamily	FAD/NAD(P)-binding domain superfamily	Interproscan
IPR049398	Domain	ETF-QO/FixC, ubiquinone-binding	Interproscan
IPR040156	Family	Electron transfer flavoprotein-ubiquinone oxidoreductase	Interproscan
IPR007859	Domain	ETF-QO/FixX, C-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10617	ELECTRON TRANSFER FLAVOPROTEIN-UBIQUINONE OXIDOREDUCTASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004174	Molecular Function	electron-transferring-flavoprotein dehydrogenase activity	Interproscan
GO:0022900	Biological Process	electron transport chain	Interproscan
GO:0031305	Cellular Component	obsolete integral component of mitochondrial inner membrane	Interproscan
GO:0051536	Molecular Function	iron-sulfur cluster binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00311	ETFDH; electron-transferring-flavoprotein dehydrogenase	EC:1.5.5.1	Enzymes with EC numbers	-	deepkoala