Detailed information of scaffold55.g7.t1 in Aurelia aurita complex sp. Pacific

Genomic Location: scaffold55:58072...76244
NR annotation: no NCBI-NR hit recorded
Species Aurelia aurita complex sp. Pacific · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13920
all species →
zf-C3HC4_3Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF09379
all species →
FERM_NFERM N-terminal domain DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001841
all species →
DomainZinc finger, RING-typeInterproscan
IPR029071
all species →
Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR018979
all species →
DomainFERM, N-terminalInterproscan
IPR011993
all species →
Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR013083
all species →
Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23280
all species →
4.1 G PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004842
all species →
Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0006511
all species →
Biological Processubiquitin-dependent protein catabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for scaffold55.g7.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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