Detailed information of scaffold56.g40.t2 in Morbakka virulenta

Genomic Location: scaffold56:1627817...1729992
NR annotation: CAB4024880.1, Hypothetical predicted protein [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P13612Integrin alpha-4 OS=Homo sapiens OX=9606 GN=ITGA4 PE=1 SV=3
Q00651Integrin alpha-4 OS=Mus musculus OX=10090 GN=Itga4 PE=1 SV=1
B8JK39Integrin alpha-9 OS=Mus musculus OX=10090 GN=Itga9 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20806Integrin_A_Ig_3Integrin alpha Ig-like domain 3DomainInterproscan
PF13966zf-RVTzinc-binding in reverse transcriptaseDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan
PF01839FG-GAPFG-GAP repeatRepeatInterproscan
PF20805Integrin_A_Ig_2Integrin alpha Ig-like domain 2DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR048286DomainIntegrin alpha, third immunoglobulin-like domainInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR032695Homologous_superfamilyIntegrin domain superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR018184Conserved_siteIntegrin alpha chain, C-terminal cytoplasmic region, conserved siteInterproscan
IPR028994Homologous_superfamilyIntegrin alpha, N-terminalInterproscan
IPR013519RepeatIntegrin alpha beta-propellorInterproscan
IPR000413FamilyIntegrin alpha chainInterproscan
IPR026960DomainReverse transcriptase zinc-binding domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR013517RepeatFG-GAP repeatInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR048285DomainIntegrin alpha, second immunoglobulin-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23220INTEGRIN ALPHAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005178Molecular Functionintegrin bindingInterproscan
GO:0007160Biological Processcell-matrix adhesionInterproscan
GO:0007229Biological Processintegrin-mediated signaling pathwayInterproscan
GO:0008305Cellular Componentintegrin complexInterproscan
GO:0009897Cellular Componentexternal side of plasma membraneInterproscan
GO:0033627Biological Processcell adhesion mediated by integrinInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan

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