Genomic Location: scaffold56:1232822...1234793
NR annotation: no NCBI-NR hit recorded
Species abbreviation AAURI1 · all data for this species · gene families
| CDS |
| scaffold56.g86.t1 |
| Transcript |
| scaffold56.g86.t1 |
| Protein |
| scaffold56.g86.t1 |
| Family type | Membership / link |
|---|---|
| Transcription factor family | zf-CCCH · all TF in this species |
| Ubiquitin family | E3|E3 activity RING|RING · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00642 all species → | zf-CCCH | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | Family | Interproscan |
| PF13923 all species → | zf-C3HC4_2 | Zinc finger, C3HC4 type (RING finger) | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000571 all species → | Domain | Zinc finger, CCCH-type | Interproscan |
| IPR017907 all species → | Conserved_site | Zinc finger, RING-type, conserved site | Interproscan |
| IPR013083 all species → | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR039971 all species → | Family | Pre-mRNA-splicing factor CWC24-like | Interproscan |
| IPR036855 all species → | Homologous_superfamily | Zinc finger, CCCH-type superfamily | Interproscan |
| IPR001841 all species → | Domain | Zinc finger, RING-type | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12930 all species → | ZINC FINGER PROTEIN 183 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0046872 all species → | Molecular Function | metal ion binding | Interproscan |
| GO:0005684 all species → | Cellular Component | U2-type spliceosomal complex | Interproscan |
| GO:0034247 all species → | Biological Process | snoRNA splicing | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K13127 | RNF113A, CWC24; RING finger protein 113A | - | Spliceosome | ko03041 | deepkoala |
